RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SLC12A1Q13621 1099 aa5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 SYCE2Q6PIF2 218 aa5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 TMEM200AQ86VY9 491 aa5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 SIGLEC11Q96RL6 698 aa5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 PRSS22Q9GZN4 317 aa5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 Q9N2J8 555 aa5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 GTF2A1LQ9UNN4 478 aa5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 RRP7AQ9Y3A4 280 aaKnown RBP5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 COL3A1P02461 1466 aaPredicted RBP5.31□□□□□ -1.56
SHCBP1-206ENST00000567698 A0A0G2JK05 382 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 FAM90A7PA6NKC0 464 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 FAM90A22PA8MWA6 464 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 FAM90A12PA8MX19 464 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 FAM90A23PA8MXZ1 464 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 CNOT3O75175 753 aaKnown RBP5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 CTSAP10619 480 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 TFEBP19484 476 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 TYK2P29597 1187 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 ARHGAP25P42331 645 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 TLE2Q04725 743 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 UBE3AQ05086 875 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 ARL13AQ5H913 290 aaPredicted RBP5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 LIPMQ5VYY2 423 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 TTLL5Q6EMB2 1281 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 SLC30A9Q6PML9 568 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 DEF8Q6ZN54 512 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 UEVLDQ8IX04 471 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 C16orf71Q8IYS4 520 aaPredicted RBP5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 USP38Q8NB14 1042 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 KCNJ9Q92806 393 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 RBM17Q96I25 401 aaKnown RBP5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 MAELQ96JY0 434 aaKnown RBP5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 PPP1R10Q96QC0 940 aaKnown RBP5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 FAM118BQ9BPY3 351 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 CLSTN3Q9BQT9 956 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 NOD2Q9HC29 1040 aa5.3□□□□□ -1.56
SHCBP1-206ENST00000567698 PRR35P0CG20 571 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 HOXB9P17482 250 aaPredicted RBP5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 CD38P28907 300 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 TUBP50607 506 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 SRSF4Q08170 494 aaKnown RBP5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 ALKBH1Q13686 389 aaKnown RBP5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 PKP1Q13835 747 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 TAF12Q16514 161 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 GXYLT1Q4G148 440 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 ANO7Q6IWH7 933 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 MIS18BP1Q6P0N0 1132 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 DENND1BQ6P3S1 775 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 SLC2A7Q6PXP3 512 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 GALNT7Q86SF2 657 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 PIP4P1Q86T03 277 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 VPS52Q8N1B4 723 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 MSI2Q96DH6 328 aaKnown RBP5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 RNFT2Q96EX2 444 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 TBATAQ96M53 351 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 CTDSP1Q9GZU7 261 aa5.29□□□□□ -1.56
SHCBP1-206ENST00000567698 TRBV5-3A0A0A0MS03 114 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 CXorf65A6NEN9 183 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 KLK10O43240 276 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 HOXC11O43248 304 aaPredicted RBP5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 NEURL1O76050 574 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 METTL18O95568 372 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 AGR2O95994 175 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 MTNR1AP48039 350 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 ANKRD1Q15327 319 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 GPR162Q16538 588 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 MIDNQ504T8 468 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 WDR45BQ5MNZ6 344 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 SH2D4BQ5SQS7 431 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 VWA5B1Q5TIE3 1220 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 NAPEPLDQ6IQ20 393 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 BRSK2Q8IWQ3 736 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 TMEM217Q8N7C4 229 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 LSM14AQ8ND56 463 aaKnown RBP5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 COQ8BQ96D53 544 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 SCNM1Q9BWG6 230 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 TMEM184CQ9NVA4 438 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 ARL15Q9NXU5 204 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 UPB1Q9UBR1 384 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 AFG3L2Q9Y4W6 797 aa5.28□□□□□ -1.56
SHCBP1-206ENST00000567698 TTBK1Q5TCY1 1321 aaPredicted RBP5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 TCRBV7S3A2A0A539 114 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 ADAM10O14672 748 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 TLR2O60603 784 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 SLC12A2P55011 1212 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 DLGAP5Q15398 846 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 SLC9C1Q4G0N8 1177 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 Q4G0T1 1027 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 HSP90AB4PQ58FF6 505 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 ATG16L1Q676U5 607 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 ZNF626Q68DY1 528 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 FAM57BQ71RH2 274 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 FAM47BQ8NA70 645 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 HTRA1Q92743 480 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 EIF2AK1Q9BQI3 630 aaKnown RBP5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 TRIM31Q9BZY9 425 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 STN1Q9H668 368 aaKnown RBP5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 ACAD9Q9H845 621 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 SPAG4Q9NPE6 437 aa5.27□□□□□ -1.57
SHCBP1-206ENST00000567698 BTBD3Q9Y2F9 522 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms