RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 ARHGEF19Q8IW93 802 aa11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 LMO3Q8TAP4 145 aa11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 PIP4K2CQ8TBX8 421 aa11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 ERCC4Q92889 916 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 SMARCE1Q969G3 411 aa11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 RPL10LQ96L21 214 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 FASNP49327 2511 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 KNL1Q8NG31 2342 aa11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 DSPP15924 2871 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3DA0A087WVF3 549 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3IA0A087WXS9 549 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3EA0A087X179 549 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3KA0A087X1G2 549 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3FA6NER0 549 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3LB9A6J9 549 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 F5H5T6 163 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 PSMA7O14818 248 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 P4HA2O15460 535 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 SMC2O95347 1197 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3HP0C7X1 549 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 VAV1P15498 845 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 DRD3P35462 400 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 NNMTP40261 264 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 ACADSBP45954 432 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 GCNT1Q02742 428 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 CETN1Q12798 172 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 BNIP3Q12983 259 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TARDBPQ13148 414 aaKnown RBP eCLIP11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 ZC3H12AQ5D1E8 599 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 HES3Q5TGS1 186 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3GQ6DHY5 549 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3CQ6IPX1 549 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 FBXL19Q6PCT2 694 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 CLEC17AQ6ZS10 378 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 BEND5Q7L4P6 421 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TBC1D3Q8IZP1 549 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 OXR1Q8N573 874 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 SPATA20Q8TB22 786 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TSC1Q92574 1164 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 BTN2A3PQ96KV6 586 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 CEP63Q96MT8 703 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 GBP4Q96PP9 640 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 TRIM62Q9BVG3 475 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 GTPBP4Q9BZE4 634 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 ERVMER34-1Q9H9K5 563 aa11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 URB1O60287 2271 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-209ENST00000565384 GOLGA4Q13439 2230 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 LATO43561 262 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 TLX3O43711 291 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 TRUB2O95900 331 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 IGLV3-25P01717 112 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 PDGFRAP16234 1089 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 ITPKBP27987 946 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 EIF2S3P41091 472 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 RXRGP48443 463 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 METAP1P53582 386 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 SEMG2Q02383 582 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 STIM1Q13586 685 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 SLC12A1Q13621 1099 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 SFMBT2Q5VUG0 894 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 DENND1BQ6P3S1 775 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 PRPF39Q86UA1 669 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 CIR1Q86X95 450 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 SPATS2Q86XZ4 545 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 CCAR2Q8N163 923 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 MFSD2AQ8NA29 543 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 FAM131CQ96AQ9 280 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 DHTKD1Q96HY7 919 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 KREMEN1Q96MU8 473 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 SPAG5Q96R06 1193 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 UBL7Q96S82 380 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 POPDC2Q9HBU9 364 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 CYTH4Q9UIA0 394 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 AK5Q9Y6K8 562 aa11.95□□□□□ -0.5
NSMCE1-209ENST00000565384 A0A1B0GVM2 712 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 TCAF2A6NFQ2 919 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 E5RJQ4 531 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 SLC7A4O43246 635 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 PLRG1O43660 514 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 RTN2O75298 545 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 KRT5P13647 590 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 MAT2AP31153 395 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 PITX1P78337 314 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 SULT2A1Q06520 285 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 ILKQ13418 452 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 TTC39BQ5VTQ0 682 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 ISM2Q6H9L7 571 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 LRRC69Q6ZNQ3 347 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 KANSL1Q7Z3B3 1105 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 ATP6V0D2Q8N8Y2 350 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 EHBP1Q8NDI1 1231 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 STK32AQ8WU08 396 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 FRS2Q8WU20 508 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 NRSN2Q9GZP1 204 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 KDM4CQ9H3R0 1056 aa11.94□□□□□ -0.5
NSMCE1-209ENST00000565384 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms