RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 GDF9O60383 454 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 IGLV3-19P01714 112 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 CFIP05156 583 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 GNSP15586 552 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 TFE3P19532 575 aaPredicted RBP12.65□□□□□ -0.38
SPG7-211ENST00000565370 GPD1P21695 349 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 ITPKAP23677 461 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 PTPN9P43378 593 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 ARID5BQ14865 1188 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 ZSCAN23Q3MJ62 389 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 C6orf118Q5T5N4 469 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 SFMBT2Q5VUG0 894 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 PEAR1Q5VY43 1037 aaPredicted RBP12.65□□□□□ -0.38
SPG7-211ENST00000565370 CXorf57Q6NSI4 855 aaKnown RBP12.65□□□□□ -0.38
SPG7-211ENST00000565370 MON1BQ7L1V2 547 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 STRADAQ7RTN6 431 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 DSG4Q86SJ6 1040 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 RGL4Q8IZJ4 473 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 CADM4Q8NFZ8 388 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 RXFP2Q8WXD0 754 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 BAP1Q92560 729 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 IGSF8Q969P0 613 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 HAPLN3Q96S86 360 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 C2orf49Q9BVC5 232 aaPredicted RBP12.65□□□□□ -0.38
SPG7-211ENST00000565370 NUP58Q9BVL2 599 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 PCED1AQ9H1Q7 454 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 CD93Q9NPY3 652 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 PRSS16Q9NQE7 514 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 WSB2Q9NYS7 404 aaPredicted RBP12.65□□□□□ -0.38
SPG7-211ENST00000565370 NCKAP1Q9Y2A7 1128 aa12.65□□□□□ -0.38
SPG7-211ENST00000565370 LNP1A1A4G5 178 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
SPG7-211ENST00000565370 C2CD4BA6NLJ0 364 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 ADH1BP00325 375 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 TNFAIP3P21580 790 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 PLK1P53350 603 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 ATXN3P54252 364 aaPredicted RBP12.64□□□□□ -0.39
SPG7-211ENST00000565370 ATXN1P54253 815 aaKnown RBP12.64□□□□□ -0.39
SPG7-211ENST00000565370 KRT83P78385 493 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 FANCCQ00597 558 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 ELAVL3Q14576 367 aaKnown RBP12.64□□□□□ -0.39
SPG7-211ENST00000565370 DUOXA1Q1HG43 343 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 C5orf22Q49AR2 442 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 DAB2IPQ5VWQ8 1189 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 TRNP1Q6NT89 227 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 SETD3Q86TU7 594 aaPredicted RBP12.64□□□□□ -0.39
SPG7-211ENST00000565370 FAM124AQ86V42 546 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 APCDD1Q8J025 514 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 DEFB119Q8N690 84 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 GANCQ8TET4 914 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 MYO19Q96H55 970 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 MRGPRX3Q96LB0 322 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 C1orf74Q96LT6 269 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 CCDC114Q96M63 670 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 MCEEQ96PE7 176 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 PCDHB18PQ96TA0 734 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 GPR174Q9BXC1 333 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 ADAM33Q9BZ11 813 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 EDEM3Q9BZQ6 932 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 BTBD1Q9H0C5 482 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 RSPH9Q9H1X1 276 aaPredicted RBP12.64□□□□□ -0.39
SPG7-211ENST00000565370 TMEM9BQ9NQ34 198 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 PILRBQ9UKJ0 227 aa12.64□□□□□ -0.39
SPG7-211ENST00000565370 TPRP12270 2363 aaKnown RBP12.64□□□□□ -0.39
SPG7-211ENST00000565370 IGLV3-10A0A075B6K4 115 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 SIN3BO75182 1162 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 ENDOD1O94919 500 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 KCNA4P22459 653 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 MZF1P28698 734 aaPredicted RBP12.63□□□□□ -0.39
SPG7-211ENST00000565370 OR1E1P30953 314 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 ETFBP38117 255 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 CTSOP43234 321 aaPredicted RBP12.63□□□□□ -0.39
SPG7-211ENST00000565370 STK19P49842 368 aaPredicted RBP12.63□□□□□ -0.39
SPG7-211ENST00000565370 UBASH3AP57075 661 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 RPS14P62263 151 aaKnown RBP12.63□□□□□ -0.39
SPG7-211ENST00000565370 GFPT1Q06210 699 aaPredicted RBP12.63□□□□□ -0.39
SPG7-211ENST00000565370 KLHL30Q0D2K2 578 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 PTP4A2Q12974 167 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 CST6Q15828 149 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 C15orf59Q2T9L4 293 aaPredicted RBP12.63□□□□□ -0.39
SPG7-211ENST00000565370 TDRD12Q587J7 1177 aaKnown RBP12.63□□□□□ -0.39
SPG7-211ENST00000565370 FIGNQ5HY92 759 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 EFHC2Q5JST6 749 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 STPG1Q5TH74 334 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 DCUN1D2Q6PH85 259 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 SLC23A3Q6PIS1 610 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 USP30Q70CQ3 517 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 BNIPLQ7Z465 357 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 TFAP2DQ7Z6R9 452 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 PHLDB2Q86SQ0 1253 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 VPS36Q86VN1 386 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 SLC41A1Q8IVJ1 513 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 DCAF4L2Q8NA75 395 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 JOSD2Q8TAC2 188 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 FAM172AQ8WUF8 416 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 OR8D1Q8WZ84 308 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 SNX19Q92543 992 aa12.63□□□□□ -0.39
SPG7-211ENST00000565370 TRIM11Q96F44 468 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms