RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 PPP2CBP62714 309 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 PPP2CAP67775 309 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 CETN1Q12798 172 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 SFMBT2Q5VUG0 894 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 SYPL2Q5VXT5 272 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 RAP1GAP2Q684P5 730 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 CHSY1Q86X52 802 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 APCDD1Q8J025 514 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 LGI2Q8N0V4 545 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 STK40Q8N2I9 435 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 EID2Q8N6I1 236 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 LMO3Q8TAP4 145 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 TSC1Q92574 1164 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 FAM131CQ96AQ9 280 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 BTN2A3PQ96KV6 586 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 RPL10LQ96L21 214 aaKnown RBP14.56□□□□□ -0.08
CDR2-204ENST00000564542 CEP63Q96MT8 703 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 ST7Q9NRC1 585 aa14.56□□□□□ -0.08
CDR2-204ENST00000564542 CAPN9O14815 690 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 KALRNO60229 2985 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 IL1BP01584 269 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 IGLV3-25P01717 112 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 TACR2P21452 398 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 DRD3P35462 400 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 NNMTP40261 264 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 RXRGP48443 463 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 STK19P49842 368 aaPredicted RBP14.55□□□□□ -0.08
CDR2-204ENST00000564542 CLDN6P56747 220 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 ILKQ13418 452 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 STIM1Q13586 685 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 SLC12A1Q13621 1099 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 MEA1Q16626 185 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 CCDC40Q4G0X9 1142 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 HES3Q5TGS1 186 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 TTC39BQ5VTQ0 682 aaPredicted RBP14.55□□□□□ -0.08
CDR2-204ENST00000564542 NAPEPLDQ6IQ20 393 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 RRAGAQ7L523 313 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 ARHGEF19Q8IW93 802 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 STK32AQ8WU08 396 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 SMARCE1Q969G3 411 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 SPAG5Q96R06 1193 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 UBL7Q96S82 380 aaPredicted RBP14.55□□□□□ -0.08
CDR2-204ENST00000564542 KDM4CQ9H3R0 1056 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 POPDC2Q9HBU9 364 aa14.55□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3DA0A087WVF3 549 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3IA0A087WXS9 549 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3EA0A087X179 549 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3KA0A087X1G2 549 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3FA6NER0 549 aaPredicted RBP14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3LB9A6J9 549 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 F5H5T6 163 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 SLC7A4O43246 635 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3HP0C7X1 549 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 VAV1P15498 845 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 NUDT1P36639 197 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 NUCB2P80303 420 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 SULT2A1Q06520 285 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 ZC3H12AQ5D1E8 599 aaKnown RBP14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3GQ6DHY5 549 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3CQ6IPX1 549 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 FBXL19Q6PCT2 694 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 DSG4Q86SJ6 1040 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 IQCHQ86VS3 1027 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 TBC1D3Q8IZP1 549 aaPredicted RBP14.54□□□□□ -0.08
CDR2-204ENST00000564542 MFSD2AQ8NA29 543 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 PIP4K2CQ8TBX8 421 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 ERCC4Q92889 916 aaPredicted RBP14.54□□□□□ -0.08
CDR2-204ENST00000564542 DHTKD1Q96HY7 919 aaPredicted RBP14.54□□□□□ -0.08
CDR2-204ENST00000564542 SLC4A5Q9BY07 1137 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 NRSN2Q9GZP1 204 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 ARHGAP20Q9P2F6 1191 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 CNTN6Q9UQ52 1028 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 DMTF1Q9Y222 760 aa14.54□□□□□ -0.08
CDR2-204ENST00000564542 A0A1B0GVM2 712 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 TCAF2A6NFQ2 919 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 KCNU1A8MYU2 1149 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 PLRG1O43660 514 aaKnown RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 MAGEC1O60732 1142 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 TRUB2O95900 331 aaKnown RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 PDGFRAP16234 1089 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 EIF2S3P41091 472 aaKnown RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 PPP1R2P41236 205 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 OXCT1P55809 520 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 YWHAZP63104 245 aaKnown RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 SEMG2Q02383 582 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 OVGP1Q12889 678 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 BNIP3Q12983 259 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 TARDBPQ13148 414 aaKnown RBP eCLIP14.53□□□□□ -0.086e-10■■■■■ 35.1
CDR2-204ENST00000564542 EIF4EBP2Q13542 120 aaPredicted RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 RTP5Q14D33 572 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 DENND1BQ6P3S1 775 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 KANSL1Q7Z3B3 1105 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 PRPF39Q86UA1 669 aaKnown RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 TRIM69Q86WT6 500 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 SPATS2Q86XZ4 545 aaKnown RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 CCAR2Q8N163 923 aaKnown RBP14.53□□□□□ -0.08
CDR2-204ENST00000564542 ATP6V0D2Q8N8Y2 350 aa14.53□□□□□ -0.08
CDR2-204ENST00000564542 FRS2Q8WU20 508 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms