RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 ERVMER34-1Q9H9K5 563 aa17.13■□□□□ 0.33
CMTM3-205ENST00000562707 AK5Q9Y6K8 562 aa17.13■□□□□ 0.33
CMTM3-205ENST00000562707 FASNP49327 2511 aaKnown RBP17.12■□□□□ 0.33
CMTM3-205ENST00000562707 F5H5T6 163 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 WNT9AO14904 365 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 MAGEC1O60732 1142 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 MZF1P28698 734 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-205ENST00000562707 EPHA8P29322 1005 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-205ENST00000562707 GPD2P43304 727 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 NXPH1P58417 271 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 GCNT1Q02742 428 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 SULT2A1Q06520 285 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 TARDBPQ13148 414 aaKnown RBP eCLIP17.12■□□□□ 0.33
CMTM3-205ENST00000562707 ZC3H12AQ5D1E8 599 aaKnown RBP17.12■□□□□ 0.33
CMTM3-205ENST00000562707 SYPL2Q5VXT5 272 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 NAPEPLDQ6IQ20 393 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 DSG4Q86SJ6 1040 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 ATP6V0D2Q8N8Y2 350 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 MFSD2AQ8NA29 543 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 EHBP1Q8NDI1 1231 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 DHTKD1Q96HY7 919 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-205ENST00000562707 BTN2A3PQ96KV6 586 aa17.12■□□□□ 0.33
CMTM3-205ENST00000562707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.12■□□□□ 0.33
CMTM3-205ENST00000562707 XPO7Q9UIA9 1087 aaKnown RBP17.12■□□□□ 0.33
CMTM3-205ENST00000562707 MUC22E2RYF6 1773 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-205ENST00000562707 C10orf142B7Z368 130 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 KRT5P13647 590 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 NUDT1P36639 197 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 PPP1R2P41236 205 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 RXRGP48443 463 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 RPL34P49207 117 aaKnown RBP17.11■□□□□ 0.33
CMTM3-205ENST00000562707 ACADVLP49748 655 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 OXCT1P55809 520 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 CLDN6P56747 220 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 YWHAZP63104 245 aaKnown RBP17.11■□□□□ 0.33
CMTM3-205ENST00000562707 SEMG2Q02383 582 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 BNIP3Q12983 259 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 FAM46CQ5VWP2 391 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 LMO3Q8TAP4 145 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 SPATA20Q8TB22 786 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 PIP4K2CQ8TBX8 421 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 STK32AQ8WU08 396 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 CRELD1Q96HD1 420 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 SPAG5Q96R06 1193 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 MED15Q96RN5 788 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 UBL7Q96S82 380 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-205ENST00000562707 PPP1R9BQ96SB3 815 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 KDM4CQ9H3R0 1056 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 POPDC2Q9HBU9 364 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 LAMA5O15230 3695 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 NUMA1Q14980 2115 aa17.11■□□□□ 0.33
CMTM3-205ENST00000562707 RRP8O43159 456 aaKnown RBP17.1■□□□□ 0.33
CMTM3-205ENST00000562707 MED7O43513 233 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 LATO43561 262 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 TRUB2O95900 331 aaKnown RBP17.1■□□□□ 0.33
CMTM3-205ENST00000562707 PDGFRAP16234 1089 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 STK19P49842 368 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-205ENST00000562707 ILKQ13418 452 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 STAT4Q14765 748 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 RABGAP1LQ5R372 815 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 HES3Q5TGS1 186 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 TTC39BQ5VTQ0 682 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-205ENST00000562707 DENND1BQ6P3S1 775 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 ARHGEF19Q8IW93 802 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
CMTM3-205ENST00000562707 TSC1Q92574 1164 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 ERCC4Q92889 916 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-205ENST00000562707 NRSN2Q9GZP1 204 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 THAP9Q9H5L6 903 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 DMTF1Q9Y222 760 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 APC2O95996 2303 aa17.1■□□□□ 0.33
CMTM3-205ENST00000562707 KCNU1A8MYU2 1149 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 SLC7A4O43246 635 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 SLC2A3P11169 496 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 VAV1P15498 845 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 CKMT2P17540 419 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 DRD3P35462 400 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 EIF2S3P41091 472 aaKnown RBP17.09■□□□□ 0.33
CMTM3-205ENST00000562707 PLK1P53350 603 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 PPP2CBP62714 309 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 PPP2CAP67775 309 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 OVGP1Q12889 678 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 RTP5Q14D33 572 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 ACCSLQ4AC99 568 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 ISM2Q6H9L7 571 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 FBXL19Q6PCT2 694 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 IQCHQ86VS3 1027 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 OR8D1Q8WZ84 308 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 RNF34Q969K3 372 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 SLC4A5Q9BY07 1137 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 CYTH4Q9UIA0 394 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 PTPRBP23467 1997 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 ACACAQ13085 2346 aa17.09■□□□□ 0.33
CMTM3-205ENST00000562707 KNL1Q8NG31 2342 aa17.08■□□□□ 0.33
CMTM3-205ENST00000562707 A0A1B0GVM2 712 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 TCAF2A6NFQ2 919 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 E5RJQ4 531 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 RTN2O75298 545 aa17.08■□□□□ 0.32
CMTM3-205ENST00000562707 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
CMTM3-205ENST00000562707 ZNF18P17022 549 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms