RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 MMEP08473 750 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 GGCXP38435 758 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 CSNK1EP49674 416 aaKnown RBP10.6□□□□□ -0.71
CLK3-205ENST00000561673 CXCR3P49682 368 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 IRAK1P51617 712 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 PLK1P53350 603 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 FAM193AP78312 1265 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 BNC1Q01954 994 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 MTA1Q13330 715 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 SLC14A1Q13336 389 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 CST6Q15828 149 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 TTC31Q49AM3 519 aaPredicted RBP10.6□□□□□ -0.71
CLK3-205ENST00000561673 FAM102AQ5T9C2 384 aaPredicted RBP10.6□□□□□ -0.71
CLK3-205ENST00000561673 RNF219Q5W0B1 726 aaPredicted RBP10.6□□□□□ -0.71
CLK3-205ENST00000561673 USP30Q70CQ3 517 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 MMAAQ8IVH4 418 aaKnown RBP10.6□□□□□ -0.71
CLK3-205ENST00000561673 STK40Q8N2I9 435 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 OR52K2Q8NGK3 314 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 EPS8L1Q8TE68 723 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 GANCQ8TET4 914 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 PTPRN2Q92932 1015 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 BIRC7Q96CA5 298 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 ALG14Q96F25 216 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 PGAP3Q96FM1 320 aaPredicted RBP10.6□□□□□ -0.71
CLK3-205ENST00000561673 CAMK1GQ96NX5 476 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 GBP4Q96PP9 640 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 FEM1AQ9BSK4 669 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 TKTL2Q9H0I9 626 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 SIK2Q9H0K1 926 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 NEUROG2Q9H2A3 272 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 GANQ9H2C0 597 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 IL21RQ9HBE5 538 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 ANLNQ9NQW6 1124 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 FBXL12Q9NXK8 326 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 ARHGEF38Q9NXL2 777 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 SCML1Q9UN30 329 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 NCKAP1Q9Y2A7 1128 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 EPG5Q9HCE0 2579 aa10.6□□□□□ -0.71
CLK3-205ENST00000561673 CEP295Q9C0D2 2601 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.59□□□□□ -0.71
CLK3-205ENST00000561673 A0A1B0GVT2 93 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 A0A1W2PP55 124 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 EPHB6O15197 1021 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 ZZEF1O43149 2961 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SH3BP5O60239 455 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 CLDN11O75508 207 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 CNTN5O94779 1100 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 GFPT2O94808 682 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 FSBPO95073 299 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 F9P00740 461 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 VAV1P15498 845 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SPINK2P20155 84 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SLC8A1P32418 973 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SCNN1AP37088 669 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SULT1E1P49888 294 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 AFF3P51826 1226 aaKnown RBP10.59□□□□□ -0.71
CLK3-205ENST00000561673 GALCP54803 685 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 OXCT1P55809 520 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 JAM2P57087 298 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 POLR2FP61218 127 aaKnown RBP10.59□□□□□ -0.71
CLK3-205ENST00000561673 NOMO3P69849 1222 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SIM1P81133 766 aaPredicted RBP10.59□□□□□ -0.71
CLK3-205ENST00000561673 SULT2A1Q06520 285 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 FOXC1Q12948 553 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 ZNF177Q13360 481 aaPredicted RBP10.59□□□□□ -0.71
CLK3-205ENST00000561673 HLA-BQ31612 363 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SLC25A52Q3SY17 297 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 C5orf22Q49AR2 442 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 BRMS1LQ5PSV4 323 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 NAA35Q5VZE5 725 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SND1Q7KZF4 910 aaKnown RBP eCLIP10.59□□□□□ -0.71
CLK3-205ENST00000561673 ZNF683Q8IZ20 524 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 FRS2Q8WU20 508 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SLC20A1Q8WUM9 679 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 TBCBQ99426 244 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 GAREM1Q9H706 876 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 TM9SF3Q9HD45 589 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 FAM207AQ9NSI2 230 aaPredicted RBP10.59□□□□□ -0.71
CLK3-205ENST00000561673 TMEM59LQ9UK28 342 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 NOCTQ9UK39 431 aaKnown RBP10.59□□□□□ -0.71
CLK3-205ENST00000561673 STAP1Q9ULZ2 295 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 TBC1D30Q9Y2I9 924 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 OR51B4Q9Y5P0 310 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 SNX10Q9Y5X0 201 aa10.59□□□□□ -0.71
CLK3-205ENST00000561673 TPRP12270 2363 aaKnown RBP10.59□□□□□ -0.71
CLK3-205ENST00000561673 PI4KAP42356 2102 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 ASCC3Q8N3C0 2202 aaKnown RBP10.58□□□□□ -0.72
CLK3-205ENST00000561673 AKAP13Q12802 2813 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 CFAP47Q6ZTR5 3102 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 FREM2Q5SZK8 3169 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 FAM47DPA6NHR8 397 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 DRGXA6NNA5 263 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 GOLGA8SH3BPF8 625 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 RNASEH2AO75792 299 aaKnown RBP10.58□□□□□ -0.72
CLK3-205ENST00000561673 IGHV4-34P06331 123 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 TPM2P07951 284 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 ZNF18P17022 549 aa10.58□□□□□ -0.72
CLK3-205ENST00000561673 GOT1P17174 413 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms