RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 PCED1BQ96HM7 432 aa10.28□□□□□ -0.76
LRRC28-216ENST00000559819 CELF6Q96J87 481 aaKnown RBP10.28□□□□□ -0.76
LRRC28-216ENST00000559819 SYT15Q9BQS2 421 aa10.28□□□□□ -0.76
LRRC28-216ENST00000559819 PAAF1Q9BRP4 392 aa10.28□□□□□ -0.76
LRRC28-216ENST00000559819 MMADHCQ9H3L0 296 aaPredicted RBP10.28□□□□□ -0.76
LRRC28-216ENST00000559819 COPG2Q9UBF2 871 aa10.28□□□□□ -0.76
LRRC28-216ENST00000559819 DCDC2Q9UHG0 476 aa10.28□□□□□ -0.76
LRRC28-216ENST00000559819 VANGL2Q9ULK5 521 aa10.28□□□□□ -0.76
LRRC28-216ENST00000559819 SLC45A1Q9Y2W3 748 aa10.28□□□□□ -0.76
LRRC28-216ENST00000559819 C17orf102A2RUQ5 167 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 HAS3O00219 553 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 SORBS2O94875 1100 aaKnown RBP10.27□□□□□ -0.76
LRRC28-216ENST00000559819 AP2A1O95782 977 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 ZNF865P0CJ78 1059 aaPredicted RBP10.27□□□□□ -0.76
LRRC28-216ENST00000559819 RALBP11234 206 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 TUBP50607 506 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 CLCNKBP51801 687 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 CRYBB1P53674 252 aaPredicted RBP10.27□□□□□ -0.76
LRRC28-216ENST00000559819 SEMA3BQ13214 749 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 PCBP1Q15365 356 aaKnown RBP eCLIP10.27□□□□□ -0.76
LRRC28-216ENST00000559819 STXBP5Q5T5C0 1151 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 NAPRTQ6XQN6 538 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.27□□□□□ -0.76
LRRC28-216ENST00000559819 ATP2A3Q93084 1043 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 GAD1Q99259 594 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 RBBP8Q99708 897 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 FERMT1Q9BQL6 677 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.76
LRRC28-216ENST00000559819 SLC7A8Q9UHI5 535 aa10.27□□□□□ -0.76
LRRC28-216ENST00000559819 ZCWPW2A0A1B0GU75 182 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CASTOR2A6NHX0 329 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 MAGEC1O60732 1142 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 TM7SF2O76062 418 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 ACADSP16219 412 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 IDH3AP50213 366 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CDK18Q07002 472 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 USP4Q13107 963 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 PPP2R5DQ14738 602 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 FAM110CQ1W6H9 321 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 TSNAXIP1Q2TAA8 658 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 PAN2Q504Q3 1202 aaKnown RBP10.27□□□□□ -0.77
LRRC28-216ENST00000559819 RALGPS1Q5JS13 557 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 GRTP1Q5TC63 336 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CCNJLQ8IV13 435 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 KBTBD2Q8IY47 623 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 GSTCDQ8NEC7 633 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 AGR3Q8TD06 166 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 ANKRD27Q96NW4 1050 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 PARK7Q99497 189 aaKnown RBP10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CPNE1Q99829 537 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 DNAI2Q9GZS0 605 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 LRRC40Q9H9A6 602 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CHRAC1Q9NRG0 131 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 FBXW11Q9UKB1 542 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 SF3B1O75533 1304 aaKnown RBP eCLIP10.27□□□□□ -0.77
LRRC28-216ENST00000559819 USP1O94782 785 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CTSHP09668 335 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CYP2B6P20813 491 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 GARSP41250 739 aaKnown RBP10.27□□□□□ -0.77
LRRC28-216ENST00000559819 ABCE1P61221 599 aaKnown RBP10.27□□□□□ -0.77
LRRC28-216ENST00000559819 NAB1Q13506 487 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 ANKRD20A4Q4UJ75 823 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 FSTL4Q6MZW2 842 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 ARHGAP36Q6ZRI8 547 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 BHLHA9Q7RTU4 235 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 ARHGAP24Q8N264 748 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 EFCAB3Q8N7B9 438 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CFAP61Q8NHU2 1237 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 UCMAQ8WVF2 138 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 NAT9Q9BTE0 207 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 TKTL2Q9H0I9 626 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 CASS4Q9NQ75 786 aa10.27□□□□□ -0.77
LRRC28-216ENST00000559819 IARS2Q9NSE4 1012 aaKnown RBP10.27□□□□□ -0.77
LRRC28-216ENST00000559819 STX18Q9P2W9 335 aaKnown RBP10.27□□□□□ -0.77
LRRC28-216ENST00000559819 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 ZNF195O14628 629 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 SIN3BO75182 1162 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 ZMPSTE24O75844 475 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 LUC7L3O95232 432 aaKnown RBP10.26□□□□□ -0.77
LRRC28-216ENST00000559819 JCHAINP01591 159 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 LTFP02788 710 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 CPA3P15088 417 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 CD1EP15812 388 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 SAT1P21673 171 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 NMBRP28336 390 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 CPOXP36551 454 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 TSC2P49815 1807 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 LIMK2P53671 638 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 PPIDQ08752 370 aaKnown RBP10.26□□□□□ -0.77
LRRC28-216ENST00000559819 OTOP3Q7RTS5 596 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 NET1Q7Z628 596 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-216ENST00000559819 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 ZNF781Q8N8C0 355 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 PPP4R1Q8TF05 950 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 NTAN1Q96AB6 310 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 GBA3Q9H227 469 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 MAN1C1Q9NR34 630 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 C20orf96Q9NUD7 363 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-216ENST00000559819 BFARQ9NZS9 450 aa10.26□□□□□ -0.77
LRRC28-216ENST00000559819 APOBEC2Q9Y235 224 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms