RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 RPS24P62847 133 aaKnown RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 SFSWAPQ12872 951 aaKnown RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 MTA1Q13330 715 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 TPD52L1Q16890 204 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 EXOC3L4Q17RC7 722 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 MS4A13Q5J8X5 152 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 TTC39BQ5VTQ0 682 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 RNF219Q5W0B1 726 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 DENND1BQ6P3S1 775 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 IL27RAQ6UWB1 636 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 FAM124AQ86V42 546 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 NAXDQ8IW45 347 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 FAM114A1Q8IWE2 563 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 CARNMT1Q8N4J0 409 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 ZNF366Q8N895 744 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 ATP6V0D2Q8N8Y2 350 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 KDM1BQ8NB78 822 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 OR2I1PQ8NGU4 316 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 FIBINQ8TAL6 211 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 ZNF606Q8WXB4 792 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 SLC39A13Q96H72 371 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 BTN2A3PQ96KV6 586 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 CRACR2AQ9BSW2 395 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 BTBD1Q9H0C5 482 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 NUCKS1Q9H1E3 243 aaKnown RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 THAP9Q9H5L6 903 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 FAM204AQ9H8W3 233 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 ASNSD1Q9NWL6 643 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 SUN2Q9UH99 717 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 EIF2B4Q9UI10 523 aaKnown RBP8.34□□□□□ -1.07
TRAF3-205ENST00000558700 SCML1Q9UN30 329 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 NAALADL1Q9UQQ1 740 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 CEP83Q9Y592 693 aa8.34□□□□□ -1.07
TRAF3-205ENST00000558700 ITIH6Q6UXX5 1313 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 A0A1B0GVM2 712 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SPAARA0A1B0GVQ0 90 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 TCAF2A6NFQ2 919 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 F5H5T6 163 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 BCAT2O15382 392 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 HSF2BPO75031 334 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 PLXNA2O75051 1894 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 GJB3O75712 270 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SEMA4FO95754 770 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 TRUB2O95900 331 aaKnown RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 IGLV3-25P01717 112 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 PROS1P07225 676 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 GLI1P08151 1106 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SRPRAP08240 638 aaKnown RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 ZNF883P0CG24 379 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 CD59P13987 128 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 ABCB4P21439 1286 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 MAOBP27338 520 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 CSKP41240 450 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 MATKP42679 507 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 MTIF2P46199 727 aaKnown RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 OXCT1P55809 520 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SNX16P57768 344 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 RPS14P62263 151 aaKnown RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 YWHAZP63104 245 aaKnown RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 CDK17Q00537 523 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 TEAD4Q15561 434 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 CAMK4Q16566 473 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 MAN2A1Q16706 1144 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 ARHGAP44Q17R89 818 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 HNRNPA1L2Q32P51 320 aaKnown RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 DCAF6Q58WW2 860 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 PITRM1Q5JRX3 1037 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 RABGAP1LQ5R372 815 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SYPL2Q5VXT5 272 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 RAP1GAP2Q684P5 730 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 USP30Q70CQ3 517 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 TMEM110Q86TL2 294 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 CREBRFQ8IUR6 639 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 CCDC116Q8IYX3 515 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 LGI2Q8N0V4 545 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 MLKLQ8NB16 471 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SHC3Q92529 594 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 TTC17Q96AE7 1141 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 C2orf49Q9BVC5 232 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SCNM1Q9BWG6 230 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SAP130Q9H0E3 1048 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SGK2Q9HBY8 427 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 PRSS16Q9NQE7 514 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 CHMP5Q9NZZ3 219 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 SLC12A6Q9UHW9 1150 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 WASF3Q9UPY6 502 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 NCKAP1Q9Y2A7 1128 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.33□□□□□ -1.08
TRAF3-205ENST00000558700 NEUROG3Q9Y4Z2 214 aa8.33□□□□□ -1.08
TRAF3-205ENST00000558700 TMEM131Q92545 1883 aa8.32□□□□□ -1.08
TRAF3-205ENST00000558700 NUMA1Q14980 2115 aa8.32□□□□□ -1.08
TRAF3-205ENST00000558700 EDDM13A0A1B0GTR0 161 aa8.32□□□□□ -1.08
TRAF3-205ENST00000558700 BECN2A8MW95 431 aa8.32□□□□□ -1.08
TRAF3-205ENST00000558700 C1QTNF9BB2RNN3 333 aa8.32□□□□□ -1.08
TRAF3-205ENST00000558700 FLRT2O43155 660 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms