RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 LMAN2Q12907 356 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 CRY1Q16526 586 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 ODF2Q5BJF6 829 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 TRNP1Q6NT89 227 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 LPCAT2Q7L5N7 544 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 POLNQ7Z5Q5 900 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 SFTPA1Q8IWL2 248 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 RCOR2Q8IZ40 523 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 DCP1BQ8IZD4 617 aaKnown RBP13.96□□□□□ -0.17
TMED3-205ENST00000558562 CHCHD4Q8N4Q1 142 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 KCTD13Q8WZ19 329 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 SMARCD1Q96GM5 515 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 KLHL11Q9NVR0 708 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 EVLQ9UI08 416 aaPredicted RBP13.96□□□□□ -0.17
TMED3-205ENST00000558562 DMGDHQ9UI17 866 aaKnown RBP13.96□□□□□ -0.17
TMED3-205ENST00000558562 MBD1Q9UIS9 605 aaPredicted RBP13.96□□□□□ -0.17
TMED3-205ENST00000558562 IGSF10Q6WRI0 2623 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 TRAV19A0A0A6YYK7 116 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 TCRBV7S2A1N4TA0A589 114 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SART1O43290 800 aaKnown RBP13.95□□□□□ -0.18
TMED3-205ENST00000558562 BEST1O76090 585 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 KRT7P08729 469 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 USP17L7P0C7H9 530 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 CYP2F1P24903 491 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SDC4P31431 198 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 OPRD1P41143 372 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 MAP3K7CLP57077 242 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 FAM193AP78312 1265 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SMARCB1Q12824 385 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 USP4Q13107 963 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SIX1Q15475 284 aaPredicted RBP13.95□□□□□ -0.18
TMED3-205ENST00000558562 MAPRE1Q15691 268 aaKnown RBP13.95□□□□□ -0.18
TMED3-205ENST00000558562 MAP9Q49MG5 647 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 EFHC1Q5JVL4 640 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 TXNRD3NBQ6F5E7 133 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 FAM171BQ6P995 826 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 MAATS1Q7Z4T9 603 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 MTERF4Q7Z6M4 381 aaKnown RBP13.95□□□□□ -0.18
TMED3-205ENST00000558562 PIP4P1Q86T03 277 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SCUBE3Q8IX30 993 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SIX6OS1Q8N1H7 587 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 ARFGAP1Q8N6T3 406 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 ARL14EPQ8N8R7 260 aaPredicted RBP13.95□□□□□ -0.18
TMED3-205ENST00000558562 PRELID2Q8N945 189 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SH3RF2Q8TEC5 729 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 CLEC4CQ8WTT0 213 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 MAGOHBQ96A72 148 aaKnown RBP13.95□□□□□ -0.18
TMED3-205ENST00000558562 RNF25Q96BH1 459 aaPredicted RBP13.95□□□□□ -0.18
TMED3-205ENST00000558562 RUNDC3BQ96NL0 473 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SLITRK1Q96PX8 696 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SMOQ99835 787 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 GTPBP2Q9BX10 602 aaKnown RBP13.95□□□□□ -0.18
TMED3-205ENST00000558562 OSBPL8Q9BZF1 889 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 ZWILCHQ9H900 591 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 ARFGAP3Q9NP61 516 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.95□□□□□ -0.18
TMED3-205ENST00000558562 MMP17Q9ULZ9 603 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 ADAMTS20P59510 1910 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 ADAMTS9Q9P2N4 1935 aa13.95□□□□□ -0.18
TMED3-205ENST00000558562 C2orf78A6NCI8 922 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 DAB1O75553 588 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 SEC31AO94979 1220 aaKnown RBP13.94□□□□□ -0.18
TMED3-205ENST00000558562 TRUB2O95900 331 aaKnown RBP13.94□□□□□ -0.18
TMED3-205ENST00000558562 CFIP05156 583 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 RARAP10276 462 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 RALAP11233 206 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 TNFRSF8P28908 595 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 MIPP30301 263 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 CHRNA3P32297 505 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 PCK1P35558 622 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 COPS2P61201 443 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 NR1H3Q13133 447 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 SEMA3BQ13214 749 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 DHX34Q14147 1143 aaKnown RBP13.94□□□□□ -0.18
TMED3-205ENST00000558562 LLGL1Q15334 1064 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 TAF5Q15542 800 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 CYP1B1Q16678 543 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 CDO1Q16878 200 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 C15orf59Q2T9L4 293 aaPredicted RBP13.94□□□□□ -0.18
TMED3-205ENST00000558562 ATP13A4Q4VNC1 1196 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 ARCQ7LC44 396 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 SYT12Q8IV01 421 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 IFT20Q8IY31 132 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 DEFB119Q8N690 84 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 ALLCQ8N6M5 410 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 HNRNPLLQ8WVV9 542 aaKnown RBP13.94□□□□□ -0.18
TMED3-205ENST00000558562 PKMYT1Q99640 499 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 NCAPGQ9BPX3 1015 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 ZDHHC4Q9NPG8 344 aa13.94□□□□□ -0.18
TMED3-205ENST00000558562 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
TMED3-205ENST00000558562 LRRD1A4D1F6 860 aa13.93□□□□□ -0.18
TMED3-205ENST00000558562 FAM187AA6NFU0 413 aa13.93□□□□□ -0.18
TMED3-205ENST00000558562 SGK1O00141 431 aa13.93□□□□□ -0.18
TMED3-205ENST00000558562 TNFRSF10BO14763 440 aa13.93□□□□□ -0.18
TMED3-205ENST00000558562 TTI1O43156 1089 aa13.93□□□□□ -0.18
TMED3-205ENST00000558562 HSF2BPO75031 334 aa13.93□□□□□ -0.18
TMED3-205ENST00000558562 ALDH1A2O94788 518 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms