RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 NUP58Q9BVL2 599 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 ACTRT3Q9BYD9 372 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TRIM54Q9BYV2 358 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TPSD1Q9BZJ3 242 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TMEM60Q9H2L4 133 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 KLK15Q9H2R5 256 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 CCDC134Q9H6E4 229 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TMBIM4Q9HC24 238 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 GPR108Q9NPR9 543 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 PLCB1Q9NQ66 1216 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 CPSF2Q9P2I0 782 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 KLHL42Q9P2K6 505 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 RNF14Q9UBS8 474 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 FBXO2Q9UK22 296 aaPredicted RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 SNX12Q9UMY4 172 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 PLEKHM1Q9Y4G2 1056 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 ASB3Q9Y575 518 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 NUP188Q5SRE5 1749 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 DOCK2Q92608 1830 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 ATAD5Q96QE3 1844 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 KIF13BQ9NQT8 1826 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 MYH2Q9UKX2 1941 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 DLEC1Q9Y238 1755 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 ATP8B3O60423 1300 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 PDS5AQ29RF7 1337 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 ARAP2Q8WZ64 1704 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 WNK3Q9BYP7 1800 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 PI4KAP2A4QPH2 592 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 GMNCA6NCL1 334 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 LINC00473A8K010 186 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 E7ENQ6 273 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 FAM227AF5H4B4 570 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 H0YGN5 161 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 GRM8O00222 908 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 MPHOSPH10O00566 681 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 CES2O00748 559 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 ASAP2O43150 1006 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 CTNND1O60716 968 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 PPFIA2O75334 1257 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 BAG3O95817 575 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 OAS1P00973 400 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 PDHA1P08559 390 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 DRD4P21917 467 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 FBLP22087 321 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 VIPR2P41587 438 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 GRIA3P42263 894 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 PIP4K2AP48426 406 aaPredicted RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 SLC11A2P49281 568 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 ZNF131P52739 623 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 COPB1P53618 953 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 RCAN1P53805 252 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 UCP3P55916 312 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 LILRA4P59901 499 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 KRT83P78385 493 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 IFT88Q13099 833 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 OS9Q13438 667 aaPredicted RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 NAA25Q14CX7 972 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 MLC1Q15049 377 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 KRT31Q15323 416 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 CDC37Q16543 378 aaPredicted RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 ACCSLQ4AC99 568 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 MINDY4Q4G0A6 757 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 FBXO42Q6P3S6 717 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 SLC30A9Q6PML9 568 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 KSR2Q6VAB6 950 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 MAEAQ7L5Y9 396 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 SPATA21Q7Z572 469 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 PIGWQ7Z7B1 504 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 ZNF575Q86XF7 245 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 KIAA0319LQ8IZA0 1049 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.45□□□□□ -1.86
HERC1-203ENST00000558532 TEX9Q8N6V9 391 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 PI4KAP1Q8N8J0 262 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 BOLLQ8N9W6 283 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 SPATA4Q8NEY3 305 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 IL31RAQ8NI17 732 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 NSMCE1Q8WV22 266 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 KBTBD7Q8WVZ9 684 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 MAML1Q92585 1016 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 TLCD1Q96CP7 247 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 BICD1Q96G01 975 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 ZNF764Q96H86 408 aaPredicted RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 CCDC114Q96M63 670 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 NEUROD6Q96NK8 337 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 PAIP2Q9BPZ3 127 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 DPH1Q9BZG8 443 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 TSGA10Q9BZW7 698 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 BOLA2Q9H3K6 86 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 TAF1DQ9H5J8 278 aaPredicted RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 KIF9Q9HAQ2 790 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 IL17RBQ9NRM6 502 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 SEMA4GQ9NTN9 838 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 HAUS2Q9NVX0 235 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 PIH1D1Q9NWS0 290 aaKnown RBP3.45□□□□□ -1.86
HERC1-203ENST00000558532 AATFQ9NY61 560 aaKnown RBP eCLIP3.45□□□□□ -1.86
HERC1-203ENST00000558532 MIS18AQ9NYP9 233 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 XPR1Q9UBH6 696 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 HDAC6Q9UBN7 1215 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 DKK3Q9UBP4 350 aa3.45□□□□□ -1.86
HERC1-203ENST00000558532 RWDD2AQ9UIY3 292 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms