RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 LILRB5O75023 590 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 LRCH4O75427 683 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 EPHX1P07099 455 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 TMEM253P0C7T8 217 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 HLA-EP13747 358 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 PRKCHP24723 683 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 OR1E1P30953 314 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 L1CAMP32004 1257 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 PCK1P35558 622 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 CTSOP43234 321 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-205ENST00000558428 PLK1P53350 603 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 ECT2LQ008S8 904 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 ENPP2Q13822 863 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 ACAP1Q15027 740 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 PTPRNQ16849 979 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 C6orf118Q5T5N4 469 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 DAB2IPQ5VWQ8 1189 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 RNF219Q5W0B1 726 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-205ENST00000558428 KIAA1211LQ6NV74 962 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 SETD3Q86TU7 594 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-205ENST00000558428 RASSF3Q86WH2 238 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 PGBD3Q8N328 593 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 MDGA1Q8NFP4 955 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 HMGB4Q8WW32 186 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 FAM122AQ96E09 287 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 PEBP4Q96S96 227 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 PHOX2BQ99453 314 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 EPAS1Q99814 870 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 SNRNP25Q9BV90 132 aaKnown RBP12.7□□□□□ -0.38
SMAD3-205ENST00000558428 TPSD1Q9BZJ3 242 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 MUC3BQ9H195 1237 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 GPATCH2LQ9NWQ4 482 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 IMPACTQ9P2X3 320 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 VPS28Q9UK41 221 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 USP18Q9UMW8 372 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 AP4E1Q9UPM8 1137 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 NUP205Q92621 2012 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
SMAD3-205ENST00000558428 GOLGA6L6A8MZA4 724 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-205ENST00000558428 SYNCRIPO60506 623 aaKnown RBP12.69□□□□□ -0.38
SMAD3-205ENST00000558428 SRPRAP08240 638 aaKnown RBP12.69□□□□□ -0.38
SMAD3-205ENST00000558428 RHOQP17081 205 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 EPHB2P29323 1055 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 CYLC1P35663 651 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-205ENST00000558428 SULT2A1Q06520 285 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 SRSF5Q13243 272 aaKnown RBP12.69□□□□□ -0.38
SMAD3-205ENST00000558428 ERMARDQ5T6L9 678 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-205ENST00000558428 CCDC170Q8IYT3 715 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 ABCA7Q8IZY2 2146 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 ZNF366Q8N895 744 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 NIPA2Q8N8Q9 360 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 ALG14Q96F25 216 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 RPL10LQ96L21 214 aaKnown RBP12.69□□□□□ -0.38
SMAD3-205ENST00000558428 MRGPRX3Q96LB0 322 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 FEM1AQ9BSK4 669 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 TMEM245Q9H330 911 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 DHX35Q9H5Z1 703 aaKnown RBP12.69□□□□□ -0.38
SMAD3-205ENST00000558428 OSGEPQ9NPF4 335 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 ZNF212Q9UDV6 495 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 NEU3Q9UQ49 428 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 ERVW-1Q9UQF0 538 aa12.69□□□□□ -0.38
SMAD3-205ENST00000558428 A0A0D9SEW6 157 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 ILVBLA1L0T0 632 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SOWAHDA6NJG2 315 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 HRO43593 1189 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 GABRG2P18507 467 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 NDUFV2P19404 249 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 FECHP22830 423 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 CNR2P34972 360 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 PLA2G5P39877 138 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SSR1P43307 286 aaKnown RBP12.68□□□□□ -0.38
SMAD3-205ENST00000558428 MAPKAPK2P49137 400 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 STK19P49842 368 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-205ENST00000558428 TPI1P60174 286 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 KRT83P78385 493 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SEMA3BQ13214 749 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SPA17Q15506 151 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 CA9Q16790 459 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SMTNL2Q2TAL5 461 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 CYP4V2Q6ZWL3 525 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-205ENST00000558428 NLRP14Q86W24 1093 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 TMTC1Q8IUR5 882 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SLC35G2Q8TBE7 412 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 NKD2Q969F2 451 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-205ENST00000558428 MYO19Q96H55 970 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 KCTD15Q96SI1 283 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SEMA4AQ9H3S1 761 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 RETREG1Q9H6L5 497 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 CATSPERBQ9H7T0 1116 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 ZWILCHQ9H900 591 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 CD248Q9HCU0 757 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 TMEM248Q9NWD8 314 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SUN2Q9UH99 717 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 DNAI1Q9UI46 699 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 SLC25A13Q9UJS0 675 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 INTUQ9ULD6 942 aa12.68□□□□□ -0.38
SMAD3-205ENST00000558428 OR51B4Q9Y5P0 310 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms