RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TMEM9BQ9NQ34 198 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 MAGEC2Q9UBF1 373 aaPredicted RBP9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 CGGBP1Q9UFW8 167 aaPredicted RBP9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 CDH9Q9ULB4 789 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 MMP17Q9ULZ9 603 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 INVSQ9Y283 1065 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 SRPRBQ9Y5M8 271 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 TSC2P49815 1807 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 ASCC3Q8N3C0 2202 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 PATE3B3GLJ2 98 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 SMAD7O15105 426 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 WARSP23381 471 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 BDNFP23560 247 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 EIF2DP41214 584 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 P2RY2P41231 377 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 TNFRSF4P43489 277 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 SLC6A11P48066 632 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 CASP5P51878 434 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 ERVFRD-1P60508 538 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 DHCR24Q15392 516 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 C2orf27AQ580R0 203 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 RRAGBQ5VZM2 374 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 UNQ6494/PRO21346Q6UXR6 183 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 C4orf50Q6ZRC1 276 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 DENND5BQ6ZUT9 1274 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 PIP4P1Q86T03 277 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 SCN4BQ8IWT1 228 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 ADGRF2Q8IZF7 708 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 IL17RCQ8NAC3 791 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 MDGA1Q8NFP4 955 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 OR5B17Q8NGF7 314 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 MYCBPAPQ8TBZ2 947 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 HPDLQ96IR7 371 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 C8orf48Q96LL4 319 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 FNBP1Q96RU3 617 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 RBAKQ9NYW8 714 aaPredicted RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 IL37Q9NZH6 218 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 TRPM5Q9NZQ8 1165 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 FBXO2Q9UK22 296 aaPredicted RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 RALYQ9UKM9 306 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 ACSL6Q9UKU0 697 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 NME7Q9Y5B8 376 aa9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 MORC2Q9Y6X9 1032 aaPredicted RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 ZNF638Q14966 1978 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-204ENST00000556268 FAM221BA6H8Z2 402 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 GOLGA8IPA6NC78 632 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 TCAF2A6NFQ2 919 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 GOLGA8JA6NMD2 632 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 SLC9A3R1O14745 358 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 KIAA0391O15091 583 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 SEMA7AO75326 666 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 TACC1O75410 805 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 TOP3BO95985 862 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 OAS1P00973 400 aaKnown RBP9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 CAPNS1P04632 268 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 CYP17A1P05093 508 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 PDGFRBP09619 1106 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 HOXD13P35453 343 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 GNL1P36915 607 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 GRIA2P42262 883 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 MYO1EQ12965 1108 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 ALCAMQ13740 583 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 KCNB1Q14721 858 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 SURF1Q15526 300 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 EMC10Q5UCC4 262 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 SNX30Q5VWJ9 437 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 HLA-DQA1Q5Y7H0 255 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 FILIP1Q7Z7B0 1213 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 SFTPA1Q8IWL2 248 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 GPD1LQ8N335 351 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 CCDC33Q8N5R6 958 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 PCED1BQ96HM7 432 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 PTCHD1Q96NR3 888 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 CLIC6Q96NY7 704 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 PNKPQ96T60 521 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 SYT15Q9BQS2 421 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 FGFBP2Q9BYJ0 223 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 MTMR12Q9C0I1 747 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 TMEM74BQ9NUR3 256 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 EHD2Q9NZN4 543 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 TBC1D7Q9P0N9 293 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 APEX2Q9UBZ4 518 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 MBD1Q9UIS9 605 aaPredicted RBP9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 SMC3Q9UQE7 1217 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 CLIC4Q9Y696 253 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 ANAPC1Q9H1A4 1944 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 PTPRJQ12913 1337 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 SPEGQ15772 3267 aa9.5□□□□□ -0.89
GTF2A1-204ENST00000556268 IGF2RP11717 2491 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ZFYVE26Q68DK2 2539 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 OBSL1O75147 1896 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 CACNA1EQ15878 2313 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 TEX51A0A1B0GUA7 166 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ANKRD34BA5PLL1 514 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 TMEM8BA6NDV4 472 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 ZNF233A6NK53 670 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 NPIPB6E9PJ23 425 aa9.49□□□□□ -0.89
GTF2A1-204ENST00000556268 SGK1O00141 431 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms