RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 MEIS3P2A8K0S8 358 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 NDC80O14777 642 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 XPO1O14980 1071 aaKnown RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 INPPL1O15357 1258 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 LAMTOR5O43504 91 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 SLC28A2O43868 658 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 PRPSAP2O60256 369 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 MGEA5O60502 916 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 LRCH4O75427 683 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 TRUB2O95900 331 aaKnown RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 POMCP01189 267 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 DCNP07585 359 aaKnown RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 CCDC130P13994 396 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 TFE3P19532 575 aaPredicted RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 ITIH2P19823 946 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 KDELR1P24390 212 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 CTNNB1P35222 781 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 RPL34P49207 117 aaKnown RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 AARSP49588 968 aaKnown RBP eCLIP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 CSTF1Q05048 431 aaKnown RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 SCAPQ12770 1279 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 SNX1Q13596 522 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 KCNC3Q14003 757 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 SIX1Q15475 284 aaPredicted RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 UPP1Q16831 310 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 ATP13A4Q4VNC1 1196 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 BOLA3Q53S33 107 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 MDH1BQ5I0G3 518 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 RPS26P11Q5JNZ5 115 aaPredicted RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 EFHC2Q5JST6 749 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 C6orf118Q5T5N4 469 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 DAB2IPQ5VWQ8 1189 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 DUPD1Q68J44 220 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 TTC27Q6P3X3 843 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 ARCQ7LC44 396 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 OSTM1Q86WC4 334 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 MAP7D3Q8IWC1 876 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 TRIM42Q8IWZ5 723 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 MREGQ8N565 214 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 KCTD6Q8NC69 237 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 BBOF1Q8ND07 529 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 CCHCR1Q8TD31 782 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 C1orf54Q8WWF1 131 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 SEPT8Q92599 483 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 ZNF689Q96CS4 500 aaPredicted RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 PKNOX2Q96KN3 472 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 GDAP1L1Q96MZ0 367 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 YME1L1Q96TA2 773 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 SYT15Q9BQS2 421 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 TRIM51Q9BSJ1 452 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 MAK16Q9BXY0 300 aaKnown RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 UBXN6Q9BZV1 441 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 TRIM31Q9BZY9 425 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 DCLK3Q9C098 648 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 TSPYL1Q9H0U9 437 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 ZWILCHQ9H900 591 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 LRRC4Q9HBW1 653 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 PCDH12Q9NPG4 1184 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 DLGAP2Q9P1A6 1054 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 TJP2Q9UDY2 1190 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 MTRF1LQ9UGC7 380 aaKnown RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 HPCAL4Q9UM19 191 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 DRG1Q9Y295 367 aaKnown RBP7.07□□□□□ -1.28
SLIRP-204ENST00000555890 SNX24Q9Y343 169 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 NME7Q9Y5B8 376 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 FLNCQ14315 2725 aa7.07□□□□□ -1.28
SLIRP-204ENST00000555890 KIAA1671Q9BY89 1806 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 hCG_1818297A0A087WSY0 165 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CASTOR2A6NHX0 329 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 C9IYK1 514 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PIK3R2O00459 728 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PAPSS1O43252 624 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 EFSO43281 561 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 HCRTO43612 131 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 TRAPPC3O43617 180 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 B3GAT3O94766 335 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FBXO21O94952 628 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 MAP3K6O95382 1288 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CYP11A1P05108 521 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ITGB1P05556 798 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ASGR2P07307 311 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FAM200BP0CF97 657 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FAM157BP0CG42 384 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 LCP1P13796 627 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 TYMPP19971 482 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ACAT1P24752 427 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 OAS2P29728 719 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 MIPP30301 263 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 RDXP35241 583 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 ADRA1BP35368 520 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 HSPA9P38646 679 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CDKN2BP42772 138 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PTPN9P43378 593 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 GRIA4P48058 902 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 FAM189BP81408 668 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 SLC25A11Q02978 314 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 CAV1Q03135 178 aa7.06□□□□□ -1.28
SLIRP-204ENST00000555890 RNASELQ05823 741 aaKnown RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 KLF1Q13351 362 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-204ENST00000555890 PTK6Q13882 451 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms