RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 METTL25Q8N6Q8 603 aa13.67□□□□□ -0.22
SIX1-203ENST00000554986 CATSPER1Q8NEC5 780 aa13.67□□□□□ -0.22
SIX1-203ENST00000554986 DNAJC1Q96KC8 554 aaKnown RBP13.67□□□□□ -0.22
SIX1-203ENST00000554986 FAM84AQ96KN4 292 aa13.67□□□□□ -0.22
SIX1-203ENST00000554986 SRPK1Q96SB4 655 aaKnown RBP13.67□□□□□ -0.22
SIX1-203ENST00000554986 KLF6Q99612 283 aaPredicted RBP13.67□□□□□ -0.22
SIX1-203ENST00000554986 RBAKQ9NYW8 714 aaPredicted RBP13.67□□□□□ -0.22
SIX1-203ENST00000554986 ZNF180Q9UJW8 692 aa13.67□□□□□ -0.22
SIX1-203ENST00000554986 PLLPQ9Y342 182 aa13.67□□□□□ -0.22
SIX1-203ENST00000554986 HBS1LQ9Y450 684 aaKnown RBP13.67□□□□□ -0.22
SIX1-203ENST00000554986 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.22
SIX1-203ENST00000554986 CHD7Q9P2D1 2997 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 KIAA1671Q9BY89 1806 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 hCG_1818297A0A087WSY0 165 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 LCHNA4D1U4 455 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 INPPL1O15357 1258 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 B4GALT3O60512 393 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 TRMUO75648 421 aaKnown RBP13.66□□□□□ -0.22
SIX1-203ENST00000554986 POMCP01189 267 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 MYL4P12829 197 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 NR1H2P55055 460 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 TMED1Q13445 227 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 SPIDRQ14159 915 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 TLR1Q15399 786 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 TRIP10Q15642 601 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 MFSD7Q6UXD7 560 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 ARCQ7LC44 396 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 USP37Q86T82 979 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 ARID3BQ8IVW6 561 aaPredicted RBP13.66□□□□□ -0.22
SIX1-203ENST00000554986 PDIK1LQ8N165 341 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 SLC25A41Q8N5S1 370 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 SLC26A7Q8TE54 656 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 YME1L1Q96TA2 773 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 ZBED2Q9BTP6 218 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 IQCGQ9H095 443 aaKnown RBP13.66□□□□□ -0.22
SIX1-203ENST00000554986 FAM96AQ9H5X1 160 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 TOPORSQ9NS56 1045 aaPredicted RBP13.66□□□□□ -0.22
SIX1-203ENST00000554986 DDX56Q9NY93 547 aaKnown RBP13.66□□□□□ -0.22
SIX1-203ENST00000554986 LZTS1Q9Y250 596 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 DTNAQ9Y4J8 743 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 IKBKGQ9Y6K9 419 aa13.66□□□□□ -0.22
SIX1-203ENST00000554986 SMIM28A0A1B0GU29 152 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 H3BNX3 289 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 HOXA2O43364 376 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 DNAJA2O60884 412 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 INHBAP08476 426 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 PBX2P40425 430 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 AQP5P55064 265 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 CYP24A1Q07973 514 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 NCOA4Q13772 614 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 KRT81Q14533 505 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 MYLK3Q32MK0 819 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 NOMO2Q5JPE7 1267 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 PRPF38BQ5VTL8 546 aaKnown RBP13.65□□□□□ -0.22
SIX1-203ENST00000554986 TTC39BQ5VTQ0 682 aaPredicted RBP13.65□□□□□ -0.22
SIX1-203ENST00000554986 ABI1Q8IZP0 508 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 TTC13Q8NBP0 860 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 FEZF2Q8TBJ5 459 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 CPA5Q8WXQ8 436 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 MFSD14AQ96MC6 490 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 BIRC8Q96P09 236 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 TBC1D13Q9NVG8 400 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 PTPRJQ12913 1337 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 TLL1O43897 1013 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 BANF1O75531 89 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 ARHGEF15O94989 841 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 KRT1P04264 644 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 NFICP08651 508 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 KRT10P13645 584 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 KRT5P13647 590 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 L1CAMP32004 1257 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 HSPA13P48723 471 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 COPAP53621 1224 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 TMPRSS15P98073 1019 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 TFDP3Q5H9I0 405 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 RABGAP1LQ5R372 815 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 JADE1Q6IE81 842 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 Q6ZNX1 250 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 ZNF280BQ86YH2 543 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 ERI1Q8IV48 349 aaKnown RBP13.65□□□□□ -0.22
SIX1-203ENST00000554986 TRPC4APQ8TEL6 797 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 RAD9AQ99638 391 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 PLEKHA5Q9HAU0 1116 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 PARVAQ9NVD7 372 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 CACNG4Q9UBN1 327 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 TUBGCP4Q9UGJ1 667 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 CDH22Q9UJ99 828 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 PSMD13Q9UNM6 376 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 INSL6Q9Y581 213 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 AK5Q9Y6K8 562 aa13.65□□□□□ -0.22
SIX1-203ENST00000554986 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
SIX1-203ENST00000554986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.64□□□□□ -0.23
SIX1-203ENST00000554986 SGK1O00141 431 aa13.64□□□□□ -0.23
SIX1-203ENST00000554986 DDHD2O94830 711 aa13.64□□□□□ -0.23
SIX1-203ENST00000554986 CAPNS1P04632 268 aa13.64□□□□□ -0.23
SIX1-203ENST00000554986 KCNE1P15382 129 aa13.64□□□□□ -0.23
SIX1-203ENST00000554986 ZFXP17010 805 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms