RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 PCDHB12Q9Y5F1 795 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 SNX5Q9Y5X3 404 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 WASF2Q9Y6W5 498 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 BRWD1Q9NSI6 2320 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 UBA6A0AVT1 1052 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 C16orf96A6NNT2 1141 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 DFFAO00273 331 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 PGM3O95394 542 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 CSH1P0DML2 217 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 CSH2P0DML3 217 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 T-ENOLP0DO92 83 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 HIRAP54198 1017 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 NUP107P57740 925 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 OCA2Q04671 838 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 YWHAHQ04917 246 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 SNAPC2Q13487 334 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 PDE1CQ14123 709 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 DPYSL2Q16555 572 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 NFE2Q16621 373 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 RNF220Q5VTB9 566 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TTC33Q6PID6 262 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 B4GALNT2Q8NHY0 566 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 CXorf38Q8TB03 319 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ZNF526Q8TF50 670 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 IFT43Q96FT9 208 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ELMO2Q96JJ3 720 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 CATSPER2Q96P56 530 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TWNKQ96RR1 684 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ULBP1Q9BZM6 244 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 C1orf21Q9H246 121 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 RNPEPQ9H4A4 650 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TLE6Q9H808 572 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 SYTL2Q9HCH5 934 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 S100A14Q9HCY8 104 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ENTPD7Q9NQZ7 604 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 PDLIM7Q9NR12 457 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 IRAK4Q9NWZ3 460 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TJP2Q9UDY2 1190 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 PTPRJQ12913 1337 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 PSMD12O00232 456 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 MRASO14807 208 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 E2F6O75461 281 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 FAM155BO75949 473 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 NPR3P17342 541 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TPH1P17752 444 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 EPHA3P29320 983 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 AXLP30530 894 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 CCNHP51946 323 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 ZNF132P52740 706 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 CHN2P52757 468 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 LIMK2P53671 638 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 SLC25A11Q02978 314 aaKnown RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 GAD2Q05329 585 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 SLC12A1Q13621 1099 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 PDK3Q15120 406 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TAF5Q15542 800 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TEX44Q53QW1 395 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 PLEKHG4Q58EX7 1191 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ARHGAP17Q68EM7 881 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ZNF470Q6ECI4 717 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TIGD7Q6NT04 549 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 KDELC2Q7Z4H8 507 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 LRRC49Q8IUZ0 686 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 SLC22A9Q8IVM8 553 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 WDR60Q8WVS4 1066 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 CLPTM1LQ96KA5 538 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 NDNQ99608 321 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 SLC4A5Q9BY07 1137 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TSPYL2Q9H2G4 693 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 VRTNQ9H8Y1 702 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ARHGEF4Q9NR80 690 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TBC1D23Q9NUY8 699 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 CCDC167Q9P0B6 97 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 OR12D3Q9UGF7 316 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 A0A087WXM4 84 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TCRBV7S3A2A0A539 114 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TYW5A2RUC4 315 aaKnown RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 IRF6O14896 467 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 SNX2O60749 519 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 DEAF1O75398 565 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 NDUFS3O75489 264 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 TMCC1O94876 653 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 THP07101 528 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 GJB1P08034 283 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ETV4P43268 484 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ALDH1A3P47895 512 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 PKNOX1P55347 436 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ADAMTSL3P82987 1691 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 DCTN2Q13561 401 aaKnown RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 CSHL1Q14406 222 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ARL13AQ5H913 290 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 INTS6LQ5JSJ4 861 aaKnown RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 STXBP5Q5T5C0 1151 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 MARC1Q5VT66 337 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 KIAA0408Q6ZU52 694 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 RDH11Q8TC12 318 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ZNF483Q8TF39 744 aaPredicted RBP3.97□□□□□ -1.77
KTN1-217ENST00000554831 LZICQ8WZA0 190 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 COPS5Q92905 334 aa3.97□□□□□ -1.77
KTN1-217ENST00000554831 ULK4Q96C45 1275 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms