RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 TBC1D3FA6NER0 549 aaPredicted RBP11.08□□□□□ -0.64
PNN-203ENST00000554117 C1QTNF9BB2RNN3 333 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3LB9A6J9 549 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 M0QYT0 321 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 MID1O15344 667 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 CLDN11O75508 207 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 DAB1O75553 588 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 KRT37O76014 449 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3HP0C7X1 549 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 FTH1P19P0C7X4 201 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 C1QTNF9P0C862 333 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 PDGFRAP16234 1089 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 PON1P27169 355 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 ERCC5P28715 1186 aaPredicted RBP11.08□□□□□ -0.64
PNN-203ENST00000554117 ARRB1P49407 418 aaPredicted RBP11.08□□□□□ -0.64
PNN-203ENST00000554117 SULT1E1P49888 294 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 CT47A1Q5JQC4 288 aaPredicted RBP11.08□□□□□ -0.64
PNN-203ENST00000554117 BRMS1LQ5PSV4 323 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3GQ6DHY5 549 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 NADSYN1Q6IA69 706 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3CQ6IPX1 549 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 FAM183BPQ6ZVS7 135 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 ERICH1Q86X53 443 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TBC1D3Q8IZP1 549 aaPredicted RBP11.08□□□□□ -0.64
PNN-203ENST00000554117 OR14C36Q8NHC7 312 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 WFDC5Q8TCV5 224 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 SHC3Q92529 594 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 RPL10LQ96L21 214 aaKnown RBP11.08□□□□□ -0.64
PNN-203ENST00000554117 C2orf49Q9BVC5 232 aaPredicted RBP11.08□□□□□ -0.64
PNN-203ENST00000554117 SIK2Q9H0K1 926 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 TM9SF3Q9HD45 589 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.08□□□□□ -0.64
PNN-203ENST00000554117 ZMIZ1Q9ULJ6 1067 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 VANGL2Q9ULK5 521 aa11.08□□□□□ -0.64
PNN-203ENST00000554117 NCOR2Q9Y618 2525 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 ALOX15BO15296 676 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 GRAP2O75791 330 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 FYNP06241 537 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 GOT1P17174 413 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 SPINK2P20155 84 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 EEF1GP26641 437 aaKnown RBP11.07□□□□□ -0.64
PNN-203ENST00000554117 CD38P28907 300 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 CDH4P55283 916 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 RNASE9P60153 205 aaKnown RBP11.07□□□□□ -0.64
PNN-203ENST00000554117 DEUP1Q05D60 604 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 ARL13BQ3SXY8 428 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 FKBP15Q5T1M5 1219 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 FAM102AQ5T9C2 384 aaPredicted RBP11.07□□□□□ -0.64
PNN-203ENST00000554117 GJB7Q6PEY0 223 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 SLC26A9Q7LBE3 791 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 CHCHD4Q8N4Q1 142 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 ADAMTS14Q8WXS8 1223 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 C18orf8Q96DM3 657 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 P2RY11Q96G91 374 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 PPP1R16AQ96I34 528 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 PCMTD1Q96MG8 357 aaPredicted RBP11.07□□□□□ -0.64
PNN-203ENST00000554117 CPXM1Q96SM3 734 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 CLSTN2Q9H4D0 955 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 GDF3Q9NR23 364 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 FTSJ1Q9UET6 329 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 ADAMTS1Q9UHI8 967 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 PCOLCE2Q9UKZ9 415 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 CABIN1Q9Y6J0 2220 aa11.07□□□□□ -0.64
PNN-203ENST00000554117 KMT2BQ9UMN6 2715 aaPredicted RBP11.06□□□□□ -0.64
PNN-203ENST00000554117 ACACBO00763 2458 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 A0A1W2PPC4 97 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 TTC34A8MYJ7 566 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 SLC7A4O43246 635 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 BNIP3LO60238 219 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 GJB3O75712 270 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 GABBR2O75899 941 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 IGLV3-25P01717 112 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 ITGAVP06756 1048 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 RHOCP08134 193 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 CDK4P11802 303 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 MZF1P28698 734 aaPredicted RBP11.06□□□□□ -0.64
PNN-203ENST00000554117 HNF1BP35680 557 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 CCR5P51681 352 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 PLK1P53350 603 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 GALCP54803 685 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 AUHQ13825 339 aaKnown RBP11.06□□□□□ -0.64
PNN-203ENST00000554117 KCNJ12Q14500 433 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 STAT4Q14765 748 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 SETMARQ53H47 684 aaPredicted RBP11.06□□□□□ -0.64
PNN-203ENST00000554117 FSCBQ5H9T9 825 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 C6orf118Q5T5N4 469 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 NCEH1Q6PIU2 408 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.06□□□□□ -0.64
PNN-203ENST00000554117 RAB44Q7Z6P3 723 aaPredicted RBP11.06□□□□□ -0.64
PNN-203ENST00000554117 GLRX5Q86SX6 157 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 STK40Q8N2I9 435 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 KDF1Q8NAX2 398 aaPredicted RBP11.06□□□□□ -0.64
PNN-203ENST00000554117 ATP11CQ8NB49 1132 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 ZNF397Q8NF99 534 aaPredicted RBP11.06□□□□□ -0.64
PNN-203ENST00000554117 SERAC1Q96JX3 654 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 CAMK1GQ96NX5 476 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 GBP4Q96PP9 640 aa11.06□□□□□ -0.64
PNN-203ENST00000554117 SLC2A13Q96QE2 648 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms