RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GPD1P21695 349 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 HOXA6P31267 233 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 GPC1P35052 558 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 NNMTP40261 264 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 NBL1P41271 181 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 PRKCIP41743 596 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 FNTBP49356 437 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 ATP11AP98196 1134 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 GAS6Q14393 721 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 CDO1Q16878 200 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 GAB4Q2WGN9 574 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 USP39Q53GS9 565 aaKnown RBP8.61□□□□□ -1.03
PSEN1-209ENST00000553855 MS4A13Q5J8X5 152 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 PHLDB2Q86SQ0 1253 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 C11orf74Q86VG3 221 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 TREML1Q86YW5 311 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 MCOLN2Q8IZK6 566 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 ALLCQ8N6M5 410 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 C3orf20Q8ND61 904 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 RXFP2Q8WXD0 754 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 PGAP3Q96FM1 320 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-209ENST00000553855 SPACA7Q96KW9 195 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 CFAP57Q96MR6 1250 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 HHIPQ96QV1 700 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 PCDHB18PQ96TA0 734 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 TBCBQ99426 244 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 NPY6RQ99463 290 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 NCAPGQ9BPX3 1015 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 GRIP2Q9C0E4 1043 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 TKTL2Q9H0I9 626 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 MRPL47Q9HD33 250 aaKnown RBP8.61□□□□□ -1.03
PSEN1-209ENST00000553855 PARVAQ9NVD7 372 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 ELOVL2Q9NXB9 296 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 GGA2Q9UJY4 613 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 FBXO10Q9UK96 956 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 GMEB2Q9UKD1 530 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 R4GN57 208 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 MIA3Q5JRA6 1907 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 COL4A2P08572 1712 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 KMT2EQ8IZD2 1858 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 A0A1B0GVM2 712 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 TCRBV21S2A2A0A5A6 115 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 TCAF2A6NFQ2 919 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 SIGLEC16A6NMB1 481 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 TRIM24O15164 1050 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 CLDN11O75508 207 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 LUC7L3O95232 432 aaKnown RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 LMNAP02545 664 aaKnown RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 FTLP02792 175 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 ASLP04424 464 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 CISD3P0C7P0 127 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 GZMAP12544 262 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 SKILP12757 684 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 HOXD9P28356 352 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 CASP14P31944 242 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 FLT3P36888 993 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 WASP42768 502 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 PTPN9P43378 593 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 KIR2DL1P43626 348 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 CXCR3P49682 368 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 GSCP56915 257 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 ZNF177Q13360 481 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 SLC12A1Q13621 1099 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 CRY1Q16526 586 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 HIF1AQ16665 826 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 FNDC3BQ53EP0 1204 aaKnown RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 FAM133BQ5BKY9 247 aaKnown RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 EMC10Q5UCC4 262 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 ANO7Q6IWH7 933 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 SERPINA13PQ6UXR4 307 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 PRR23BQ6ZRT6 265 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 CHST9Q7L1S5 443 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 MON1BQ7L1V2 547 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 STRADAQ7RTN6 431 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 ZNF571Q7Z3V5 609 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 WDR5BQ86VZ2 330 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 CNGA4Q8IV77 575 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 MAML2Q8IZL2 1156 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 EMC1Q8N766 993 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 IL17RCQ8NAC3 791 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 OR8K1Q8NGG5 319 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 FIBINQ8TAL6 211 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 SREK1Q8WXA9 508 aaKnown RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 ZNF653Q96CK0 615 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 MCEEQ96PE7 176 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 TTYH3Q9C0H2 523 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 PIGVQ9NUD9 493 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 ABCB8Q9NUT2 735 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 NCDNQ9UBB6 729 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 TMEM59LQ9UK28 342 aa8.6□□□□□ -1.03
PSEN1-209ENST00000553855 KIF26AQ9ULI4 1882 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-209ENST00000553855 COL4A3Q01955 1670 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 PRRT4C9JH25 899 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 PROB1E7EW31 1015 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SGK1O00141 431 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 SRGAP2O75044 1071 aa8.59□□□□□ -1.03
PSEN1-209ENST00000553855 PAGE1O75459 146 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms