RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SYNCRIPO60506 623 aaKnown RBP23.45■■□□□ 1.34
TDP1-206ENST00000553569 LRCH4O75427 683 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 EPHX1P07099 455 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 MIPP30301 263 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 OR1E1P30953 314 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 AIF1P55008 147 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 ENPP2Q13822 863 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 RASSF3Q86WH2 238 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 SPC24Q8NBT2 197 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 SNRNP25Q9BV90 132 aaKnown RBP23.45■■□□□ 1.34
TDP1-206ENST00000553569 EBF1Q9UH73 591 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 VPS28Q9UK41 221 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 AP4E1Q9UPM8 1137 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 ERVW-1Q9UQF0 538 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 TBC1D30Q9Y2I9 924 aa23.45■■□□□ 1.34
TDP1-206ENST00000553569 CCDC163A0A0D9SF12 145 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 TMEM253P0C7T8 217 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 GABRG2P18507 467 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 CDC25BP30305 580 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 ST8SIA6P61647 398 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 PIGHQ14442 188 aaPredicted RBP23.44■■□□□ 1.34
TDP1-206ENST00000553569 C6orf118Q5T5N4 469 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 SETD3Q86TU7 594 aaPredicted RBP23.44■■□□□ 1.34
TDP1-206ENST00000553569 PANX2Q96RD6 677 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 EPAS1Q99814 870 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 FEM1AQ9BSK4 669 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 SLC6A17Q9H1V8 727 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 DHX35Q9H5Z1 703 aaKnown RBP23.44■■□□□ 1.34
TDP1-206ENST00000553569 IP6K2Q9UHH9 426 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 NEU3Q9UQ49 428 aa23.44■■□□□ 1.34
TDP1-206ENST00000553569 ZBTB24O43167 697 aaPredicted RBP23.43■■□□□ 1.34
TDP1-206ENST00000553569 HRO43593 1189 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 L1CAMP32004 1257 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 STK19P49842 368 aaPredicted RBP23.43■■□□□ 1.34
TDP1-206ENST00000553569 PLK1P53350 603 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 ECT2LQ008S8 904 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 CA9Q16790 459 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 PRR23BQ6ZRT6 265 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 NKD2Q969F2 451 aaPredicted RBP23.43■■□□□ 1.34
TDP1-206ENST00000553569 ALG14Q96F25 216 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 RPL10LQ96L21 214 aaKnown RBP23.43■■□□□ 1.34
TDP1-206ENST00000553569 MRGPRX3Q96LB0 322 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 TMEM245Q9H330 911 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 CD248Q9HCU0 757 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 UVRAGQ9P2Y5 699 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 ZNF212Q9UDV6 495 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 USP18Q9UMW8 372 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 INVSQ9Y283 1065 aa23.43■■□□□ 1.34
TDP1-206ENST00000553569 MYO1FO00160 1098 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 RPP40O75818 363 aaKnown RBP23.42■■□□□ 1.34
TDP1-206ENST00000553569 TCF4P15884 667 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 RHOQP17081 205 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 NDUFV2P19404 249 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 EPHB2P29323 1055 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 SULT2A1Q06520 285 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 ACAP1Q15027 740 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 ERMARDQ5T6L9 678 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 CYP4V2Q6ZWL3 525 aaPredicted RBP23.42■■□□□ 1.34
TDP1-206ENST00000553569 CEP68Q76N32 757 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 CACUL1Q86Y37 369 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 OR7D4Q8NG98 312 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 MYO19Q96H55 970 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 PPP1R9BQ96SB3 815 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 NCAPGQ9BPX3 1015 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 MTG2Q9H4K7 406 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 ZWILCHQ9H900 591 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 OR51B4Q9Y5P0 310 aa23.42■■□□□ 1.34
TDP1-206ENST00000553569 A0A0D9SEW6 157 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 PROB1E7EW31 1015 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 SRPRAP08240 638 aaKnown RBP23.41■■□□□ 1.34
TDP1-206ENST00000553569 CNR2P34972 360 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 PCK1P35558 622 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 SSR1P43307 286 aaKnown RBP23.41■■□□□ 1.34
TDP1-206ENST00000553569 TPI1P60174 286 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 SIM2Q14190 667 aaPredicted RBP23.41■■□□□ 1.34
TDP1-206ENST00000553569 LPAL2Q16609 132 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 SMTNL2Q2TAL5 461 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 KIAA1324Q6UXG2 1013 aaKnown RBP23.41■■□□□ 1.34
TDP1-206ENST00000553569 NLRP14Q86W24 1093 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 NIPA2Q8N8Q9 360 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 GAB3Q8WWW8 586 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 KCTD15Q96SI1 283 aaPredicted RBP23.41■■□□□ 1.34
TDP1-206ENST00000553569 PSMB7Q99436 277 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 OSGEPQ9NPF4 335 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 NDFIP2Q9NV92 336 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 TMEM248Q9NWD8 314 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 DNAI1Q9UI46 699 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 SLC25A13Q9UJS0 675 aa23.41■■□□□ 1.34
TDP1-206ENST00000553569 SMG5Q9UPR3 1016 aaKnown RBP23.41■■□□□ 1.34
TDP1-206ENST00000553569 SOWAHDA6NJG2 315 aa23.4■■□□□ 1.34
TDP1-206ENST00000553569 TMEM110-MUSTN1A8MSY1 372 aa23.4■■□□□ 1.34
TDP1-206ENST00000553569 SNAP91O60641 907 aa23.4■■□□□ 1.34
TDP1-206ENST00000553569 IL1R2P27930 398 aa23.4■■□□□ 1.34
TDP1-206ENST00000553569 CYLC1P35663 651 aaPredicted RBP23.4■■□□□ 1.34
TDP1-206ENST00000553569 MAPKAPK2P49137 400 aa23.4■■□□□ 1.34
TDP1-206ENST00000553569 SEMA3BQ13214 749 aa23.4■■□□□ 1.34
TDP1-206ENST00000553569 USP39Q53GS9 565 aaKnown RBP23.4■■□□□ 1.34
TDP1-206ENST00000553569 RLN3Q8WXF3 142 aa23.4■■□□□ 1.34
TDP1-206ENST00000553569 HSPH1Q92598 858 aa23.4■■□□□ 1.34
TDP1-206ENST00000553569 MRGPRX1Q96LB2 322 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms