RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 SLC6A18Q96N87 628 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 RSPH9Q9H1X1 276 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-208ENST00000553370 MTG2Q9H4K7 406 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 COX16Q9P0S2 106 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 KIAA1522Q9P206 1035 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-208ENST00000553370 CTNND2Q9UQB3 1225 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 TLR6Q9Y2C9 796 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 BTBD3Q9Y2F9 522 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 ZDHHC9Q9Y397 364 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 COQ4Q9Y3A0 265 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 LAMA5O15230 3695 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 DOCK4Q8N1I0 1966 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 LOC400499M0QZD8 3231 aa10.26□□□□□ -0.77
ACTN1-208ENST00000553370 FAM149AA5PLN7 773 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 YKT6O15498 198 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 THAP12O43422 761 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 LUC7L3O95232 432 aaKnown RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 CALCAP01258 141 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 IL1BP01584 269 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 IGLV3-27P01718 113 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 JUNDP17535 347 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 USP8P40818 1118 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 ARRB1P49407 418 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 NUMBP49757 651 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 PMS1P54277 932 aaKnown RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 RACK1P63244 317 aaKnown RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 ECT2LQ008S8 904 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 ELOAQ14241 798 aaKnown RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 BECN1Q14457 450 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 CNGA2Q16280 664 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 HNRNPA1L2Q32P51 320 aaKnown RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 HS1BP3Q53T59 392 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 FAM133BQ5BKY9 247 aaKnown RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 PITRM1Q5JRX3 1037 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 RABGAP1LQ5R372 815 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 RAP1GAP2Q684P5 730 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 DHRS13Q6UX07 377 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 SND1Q7KZF4 910 aaKnown RBP eCLIP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 TMPRSS7Q7RTY8 843 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 DSG4Q86SJ6 1040 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 TAC4Q86UU9 113 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 ZC3H3Q8IXZ2 948 aaKnown RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 ATP6V0D2Q8N8Y2 350 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 OR2T34Q8NGX1 318 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 OR14C36Q8NHC7 312 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 FIBINQ8TAL6 211 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 DHTKD1Q96HY7 919 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 LRIG1Q96JA1 1093 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 SERAC1Q96JX3 654 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 PRICKLE1Q96MT3 831 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 NUCKS1Q9H1E3 243 aaKnown RBP10.25□□□□□ -0.77
ACTN1-208ENST00000553370 OSGEPQ9NPF4 335 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 GDF3Q9NR23 364 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 MAP10Q9P2G4 905 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 SLC25A13Q9UJS0 675 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 ERVW-1Q9UQF0 538 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 GPSM3Q9Y4H4 160 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 SLCO1B1Q9Y6L6 691 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 CELSR3Q9NYQ7 3312 aa10.25□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3DA0A087WVF3 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3IA0A087WXS9 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3EA0A087X179 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3KA0A087X1G2 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 A0A1W2PPC4 97 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3FA6NER0 549 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TTC34A8MYJ7 566 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3LB9A6J9 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TAF4O00268 1085 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 VILLO15195 856 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 BNIP3LO60238 219 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 PCDHGA12O60330 932 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 LETM1O95202 739 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-208ENST00000553370 LDOC1O95751 146 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-208ENST00000553370 SRPRAP08240 638 aaKnown RBP10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3HP0C7X1 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 ZNF18P17022 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TACR2P21452 398 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 CD38P28907 300 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 SLC8A1P32418 973 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 CTSOP43234 321 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-208ENST00000553370 CTSKP43235 329 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 GALCP54803 685 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 CYP4F3Q08477 520 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 NNTQ13423 1086 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 ACCSLQ4AC99 568 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 COBLL1Q53SF7 1204 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 DCAF6Q58WW2 860 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 MS4A13Q5J8X5 152 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 C6orf118Q5T5N4 469 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3GQ6DHY5 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 NADSYN1Q6IA69 706 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3CQ6IPX1 549 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 MMS22LQ6ZRQ5 1243 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 GATAD2AQ86YP4 633 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 SCUBE3Q8IX30 993 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 TBC1D3Q8IZP1 549 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-208ENST00000553370 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-208ENST00000553370 STK40Q8N2I9 435 aa10.24□□□□□ -0.77
ACTN1-208ENST00000553370 UBR7Q8N806 425 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms