RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 KCNAB1Q14722 419 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 CERKLQ49MI3 558 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-218ENST00000553309 ZNF626Q68DY1 528 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 FAM43BQ6ZT52 329 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-218ENST00000553309 RNF44Q7L0R7 432 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 NEK8Q86SG6 692 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 C11orf44Q8N8P7 122 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 C8orf58Q8NAV2 365 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 TRIB2Q92519 343 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 PHKBQ93100 1093 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 TTC17Q96AE7 1141 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 SNX22Q96L94 193 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 ZNF778Q96MU6 729 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 MMS19Q96T76 1030 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 BTBD1Q9H0C5 482 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 PRDM16Q9HAZ2 1276 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 NRIP3Q9NQ35 241 aa5.63□□□□□ -1.51
ATXN3-218ENST00000553309 NKX1-2Q9UD57 310 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-218ENST00000553309 EPG5Q9HCE0 2579 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 LRRC37A2A6NM11 1700 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 ECM29Q5VYK3 1845 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 PI4K2BG5E9Z4 385 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 M0R3H8 397 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 AGPSO00116 658 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 SNX2O60749 519 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 PQBP1O60828 265 aaKnown RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 GCATO75600 419 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 MT-CO3P00414 261 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 CD19P15391 556 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 EIF2S2P20042 333 aaKnown RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 CCND3P30281 292 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 PRKAR2BP31323 418 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 ANP32AP39687 249 aaKnown RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 DIO1P49895 249 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 LMAN2Q12907 356 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 FAM187BQ17R55 369 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 HSP90AB3PQ58FF7 597 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 DENND2CQ68D51 928 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 COPS6Q7L5N1 327 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 GPATCH11Q8N954 259 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 SMG7Q92540 1137 aaKnown RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 FYTTD1Q96QD9 318 aaKnown RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 HIST1H2AAQ96QV6 131 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 UNKQ9C0B0 810 aaKnown RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 COA1Q9GZY4 146 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 PDCL3Q9H2J4 239 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 TDRD3Q9H7E2 651 aaKnown RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 PANK3Q9H999 370 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 TRIM36Q9NQ86 728 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 ASIC5Q9NY37 505 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 ZNF70Q9UC06 446 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-218ENST00000553309 ZNF212Q9UDV6 495 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 CAPN11Q9UMQ6 739 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 CHD8Q9HCK8 2581 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 CFAP54Q96N23 3096 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 DOCK3Q8IZD9 2030 aa5.62□□□□□ -1.51
ATXN3-218ENST00000553309 SMIM35A0A1B0GVV1 85 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 RHPN2P1A8MT19 583 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 CHRM5P08912 532 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-218ENST00000553309 CYP2A6P11509 494 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-218ENST00000553309 CYP2B6P20813 491 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 NTSR1P30989 418 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 EIF4A1P60842 406 aaKnown RBP5.61□□□□□ -1.51
ATXN3-218ENST00000553309 IRX3P78415 501 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-218ENST00000553309 TNFAIP1Q13829 316 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 KCTD2Q14681 263 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 TAF7Q15545 349 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-218ENST00000553309 AAK1Q2M2I8 961 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 MIS18BP1Q6P0N0 1132 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 CCDC129Q6ZRS4 1044 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 KRT78Q8N1N4 520 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 GALNT16Q8N428 558 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 METTL25Q8N6Q8 603 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 ANKRD13CQ8N6S4 541 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 ZNF668Q96K58 619 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-218ENST00000553309 SNX15Q9NRS6 342 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 DNAJB11Q9UBS4 358 aa5.61□□□□□ -1.51
ATXN3-218ENST00000553309 ARAP2Q8WZ64 1704 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 ZFHX2Q9C0A1 2572 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-218ENST00000553309 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-218ENST00000553309 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-218ENST00000553309 IL18RAPO95256 599 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 PARNO95453 639 aaKnown RBP5.6□□□□□ -1.51
ATXN3-218ENST00000553309 ANXA2P07355 339 aaKnown RBP5.6□□□□□ -1.51
ATXN3-218ENST00000553309 ITGB8P26012 769 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 CCT4P50991 539 aaKnown RBP5.6□□□□□ -1.51
ATXN3-218ENST00000553309 HTRA4P83105 476 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-218ENST00000553309 PPATQ06203 517 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 TRIM60Q495X7 471 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 MANEALQ5VSG8 457 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 ZNF425Q6IV72 752 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 CLEC9AQ6UXN8 241 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 ANKRD18AQ8IVF6 992 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 WDYHV1Q96HA8 205 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 ZNF830Q96NB3 372 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-218ENST00000553309 C1QTNF7Q9BXJ2 289 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 PDGFCQ9NRA1 345 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 TMEM51Q9NW97 253 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 CORO2BQ9UQ03 480 aa5.6□□□□□ -1.51
ATXN3-218ENST00000553309 HPSEQ9Y251 543 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms