RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TMEM51Q9NW97 253 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 NUDT5Q9UKK9 219 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 ADAM28Q9UKQ2 775 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 PCDHB7Q9Y5E2 793 aa14.35□□□□□ -0.11
RAB3IP-216ENST00000552199 ARHGAP42A6NI28 874 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 USP12O75317 370 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 GRK4P32298 578 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 SERPINB4P48594 390 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 BNIP1Q12981 228 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 BFSP2Q13515 415 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 PLEKHG4Q58EX7 1191 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 MSANTD2Q6P1R3 559 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 ZNF449Q6P9G9 518 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 PACS1Q6VY07 963 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 CEP57Q86XR8 500 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 ABI1Q8IZP0 508 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 LZTR1Q8N653 840 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 STKLD1Q8NE28 680 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 DBF4BQ8NFT6 615 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 C10orf82Q8WW14 230 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 SERPINB11Q96P15 392 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 FBXO44Q9H4M3 255 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 LRRC40Q9H9A6 602 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 SLC40A1Q9NP59 571 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 BFARQ9NZS9 450 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 VANGL2Q9ULK5 521 aa14.34□□□□□ -0.11
RAB3IP-216ENST00000552199 OR6C75A6NL08 312 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 DFFAO00273 331 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 PSMD3O43242 534 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 CACNG3O60359 315 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 NPY2RP49146 381 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 NRG1Q02297 640 aaPredicted RBP14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 PRPSAP1Q14558 356 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 FAM171A1Q5VUB5 890 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 FYB2Q5VWT5 728 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 CES3Q6UWW8 571 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 NDUFAF2Q8N183 169 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 ARHGAP18Q8N392 663 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 CNTD1Q8N815 330 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 DNAAF3Q8N9W5 541 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 FCRL3Q96P31 734 aaPredicted RBP14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 SEZ6LQ9BYH1 1024 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 SLC13A1Q9BZW2 595 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 IL37Q9NZH6 218 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 SLC17A6Q9P2U8 582 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 RPS6KL1Q9Y6S9 549 aa14.33□□□□□ -0.11
RAB3IP-216ENST00000552199 RASSF9O75901 435 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 NEFHP12036 1026 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 BGNP21810 368 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 ALDH3A1P30838 453 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 CRHR1P34998 444 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 MLLT6P55198 1093 aaPredicted RBP14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 FRG1Q14331 258 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 ARHGAP36Q6ZRI8 547 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 C14orf80Q86SX3 495 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 TMEM135Q86UB9 458 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 RASSF3Q86WH2 238 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 FAM126BQ8IXS8 530 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 KLHDC8BQ8IXV7 354 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 ATPAF2Q8N5M1 289 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 ANKLE1Q8NAG6 615 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 ZNF398Q8TD17 642 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 CERS2Q96G23 380 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 C1orf74Q96LT6 269 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 PGLYRP2Q96PD5 576 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 TSSK1BQ9BXA7 367 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 GPR62Q9BZJ7 368 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 SLC39A8Q9C0K1 460 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 PCMTD2Q9NV79 361 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 TLR6Q9Y2C9 796 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 HS3ST4Q9Y661 456 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 CEP350Q5VT06 3117 aa14.33□□□□□ -0.12
RAB3IP-216ENST00000552199 MAGEB16A2A368 324 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 E9PAM4 449 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 KLF11O14901 512 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 MAFKO60675 156 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 MOCS2O96007 188 aaPredicted RBP14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 ALDH2P05091 517 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 TROVE2P10155 538 aaKnown RBP eCLIP14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 ERVK-10P10266 1014 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 CCNB1P14635 433 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 FGFR3P22607 806 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 GATMP50440 423 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 TUBP50607 506 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 NCALDP61601 193 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 USP46P62068 366 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 CERCAMQ5T4B2 595 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 AFMIDQ63HM1 303 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 ZNF280DQ6N043 979 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 ATAD1Q8NBU5 361 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 ACMSDQ8TDX5 336 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 USP33Q8TEY7 942 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 SLC39A13Q96H72 371 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 IL12RB2Q99665 862 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 ECT2Q9H8V3 914 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 NPHS2Q9NP85 383 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 GMIPQ9P107 970 aa14.32□□□□□ -0.12
RAB3IP-216ENST00000552199 ZFATQ9P243 1243 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms