RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 MBD3L4A6NDZ8 208 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 MBD3L3A6NE82 208 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 PRSS29PA6NIE9 313 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 TSPY2A6NKD2 308 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 DRGXA6NNA5 263 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 KIF28PB7ZC32 967 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 F8W8V4 182 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 PYCARD-AS1I3L0S3 204 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 M0QYG6 137 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 INPPL1O15357 1258 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 THAP12O43422 761 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 RASSF9O75901 435 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 FGF18O76093 207 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 UNC5CO95185 931 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ANXA2P07355 339 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 GRPP07492 148 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CYP21A2P08686 494 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 GHRP10912 638 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 XRCC6P12956 609 aaKnown RBP eCLIP2.64□□□□□ -1.999e-12■■■■□ 25
CPSF6-207ENST00000551516 MX1P20591 662 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 HOXA13P31271 388 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SLC6A4P31645 630 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 PPM1AP35813 382 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 THPOP40225 353 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 HALP42357 657 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 TXKP42681 527 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 TRAPPC10P48553 1259 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 TDO2P48775 406 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 PPM1FP49593 454 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SATB1Q01826 763 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 DUSP8Q13202 625 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 TRIM14Q14142 442 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 STARD3Q14849 445 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ELAVL1Q15717 326 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ASPRV1Q53RT3 343 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 INO80DQ53TQ3 878 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 PRR16Q569H4 304 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CLLU1OSQ5K130 101 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ANKRD54Q6NXT1 300 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 PGBD2Q6P3X8 592 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 DRICH1Q6PGQ1 229 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 USP17L6PQ6QN14 398 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 FAM43BQ6ZT52 329 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 MED25Q71SY5 747 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 RNF44Q7L0R7 432 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 BEND5Q7L4P6 421 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 GPRIN1Q7Z2K8 1008 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SGMS1Q86VZ5 419 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 MB21D2Q8IYB1 491 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ELOA2Q8IYF1 753 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 MYOCDQ8IZQ8 938 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 D2HGDHQ8N465 521 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SRBD1Q8N5C6 995 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SLC15A4Q8N697 577 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 MRPL43Q8N983 215 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ANKRD42Q8N9B4 389 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 RNF169Q8NCN4 708 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CCDC150Q8NCX0 1101 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 APBB2Q92870 758 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ATP6V0A1Q93050 837 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SCAMP4Q969E2 229 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 KIAA1191Q96A73 305 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 MIEF2Q96C03 454 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ZNF707Q96C28 371 aaPredicted RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SNX22Q96L94 193 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 GNRHR2Q96P88 292 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 MOGAT1Q96PD6 335 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CRB3Q9BUF7 120 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 DDX23Q9BUQ8 820 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CNPPD1Q9BV87 410 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 EIF2AQ9BY44 585 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 IFIH1Q9BYX4 1025 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 IMPG2Q9BZV3 1241 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 FTOQ9C0B1 505 aaKnown RBP eCLIP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 WDR12Q9GZL7 423 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 NAPBQ9H115 298 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 POMKQ9H5K3 350 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SMURF2Q9HAU4 748 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 RGS18Q9NS28 235 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 XPR1Q9UBH6 696 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CD207Q9UJ71 328 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CDC23Q9UJX2 597 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ITGB1BP2Q9UKP3 347 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 PNMA2Q9UL42 364 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 PADI3Q9ULW8 664 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 ZFR2Q9UPR6 939 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 LZTS1Q9Y250 596 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 KMT2EQ8IZD2 1858 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 MICAL3Q7RTP6 2002 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CCDC171Q6TFL3 1326 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 NRCAMQ92823 1304 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 F5P12259 2224 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CACNA1IQ9P0X4 2223 aa2.64□□□□□ -1.99
CPSF6-207ENST00000551516 CNOT1A5YKK6 2376 aaKnown RBP2.64□□□□□ -1.99
CPSF6-207ENST00000551516 SIP14410 1827 aa2.63□□□□□ -1.99
CPSF6-207ENST00000551516 NID2Q14112 1375 aa2.63□□□□□ -1.99
CPSF6-207ENST00000551516 IGF2RP11717 2491 aa2.63□□□□□ -1.99
CPSF6-207ENST00000551516 KALRNO60229 2985 aa2.63□□□□□ -1.99
CPSF6-207ENST00000551516 SMIM35A0A1B0GVV1 85 aa2.63□□□□□ -1.99
CPSF6-207ENST00000551516 C17orf102A2RUQ5 167 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms