RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 KCNMB3Q9NPA1 279 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 MATN2O00339 956 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 LYPLA1O75608 230 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 VAPBO95292 243 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 CALCAP01258 141 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 CREB1P16220 341 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 TAF6P49848 677 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 ZNF846Q147U1 533 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 AMHR2Q16671 573 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 ZIK1Q3SY52 487 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 TRIQKQ629K1 86 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 MAP4K3Q8IVH8 894 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 AMER2Q8N7J2 671 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 POMKQ9H5K3 350 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 ZNF180Q9UJW8 692 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 NBNO60934 754 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 BPGMP07738 259 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 IMPDH2P12268 514 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 PNPLA4P41247 253 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 FUT2Q10981 343 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 TWF1Q12792 350 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 TTC30AQ86WT1 665 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 ARL10Q8N8L6 244 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 COX4I2Q96KJ9 171 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 RAB26Q9ULW5 256 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 DOLKQ9UPQ8 538 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 WASF2Q9Y6W5 498 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 hCG_1818297A0A087WSY0 165 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 ASB14A6NK59 587 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 SNTNA6NMZ2 147 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 F8W810 466 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 H3BNX3 289 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 EIF2S1P05198 315 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 HMBSP08397 361 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 ALOX5P09917 674 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 CCDC166P0CW27 439 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 MSH3P20585 1137 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 ACO1P21399 889 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 AGO4Q9HCK5 861 aaKnown RBP16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 TMCC3Q9ULS5 477 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 RAP2CQ9Y3L5 183 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 IPPQ9Y573 584 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 SQORQ9Y6N5 450 aa16.09■□□□□ 0.17
RBFOX1-212ENST00000550418 C2orf71A6NGG8 1288 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 EPHA3P29320 983 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 NEK3P51956 506 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 MFSD4BQ5TF39 518 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 ZNF470Q6ECI4 717 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 STYK1Q6J9G0 422 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 PTAR1Q7Z6K3 402 aaPredicted RBP16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 FNDC5Q8NAU1 212 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 PSMA8Q8TAA3 256 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 RTKNQ9BST9 563 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 SPATA16Q9BXB7 569 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 GPR63Q9BZJ6 419 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 KRT84Q9NSB2 600 aa16.08■□□□□ 0.17
RBFOX1-212ENST00000550418 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 TMEM114B3SHH9 223 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 RRM2P31350 389 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 ABCG1P45844 678 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 TAS2R40P59535 323 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 SPIDRQ14159 915 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 ACSBG2Q5FVE4 666 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 EGFLAMQ63HQ2 1017 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 TIGD7Q6NT04 549 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 ZNF276Q8N554 614 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 PRMT6Q96LA8 375 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 PTPRHQ9HD43 1115 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 TSPAN16Q9UKR8 245 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 PIK3C2AO00443 1686 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 TCRBV7S2A1N4TA0A589 114 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 HACD1B0YJ81 288 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 ANKRD63C9JTQ0 380 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 SOAT1P35610 550 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 BPIFB6Q8NFQ5 453 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 TRNAU1APQ9NX07 287 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 CIDEBQ9UHD4 219 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 NR2E1Q9Y466 385 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 RPTORQ8N122 1335 aa16.08■□□□□ 0.16
RBFOX1-212ENST00000550418 SYNCRIPO60506 623 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 KATNA1O75449 491 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 PPP3CCP48454 512 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TAF1CQ15572 869 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 ANKS6Q68DC2 871 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 PALB2Q86YC2 1186 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 URGCPQ8TCY9 931 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 PNPOQ9NVS9 261 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TAS2R1Q9NYW7 299 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 SPASTQ9UBP0 616 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 CDH22Q9UJ99 828 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 UBQLN1Q9UMX0 589 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 USP20Q9Y2K6 914 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 SIGLEC16A6NMB1 481 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 USP12O75317 370 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TGFB2P61812 414 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 LSM3P62310 102 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 TNK2Q07912 1038 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 SQLEQ14534 574 aa16.07■□□□□ 0.16
RBFOX1-212ENST00000550418 GRIK5Q16478 980 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms