RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 DCBLD2Q96PD2 775 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 CYTH4Q9UIA0 394 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 SHROOM3Q8TF72 1996 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 A0A087WV48 116 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 CAPN9O14815 690 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 SART1O43290 800 aaKnown RBP15.91■□□□□ 0.14
RAB5C-205ENST00000550013 RFPL3O75679 317 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 ADH1BP00325 375 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 IL1BP01584 269 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 KRT5P13647 590 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 PDGFRAP16234 1089 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 C5AR1P21730 350 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 EPHA8P29322 1005 aaPredicted RBP15.91■□□□□ 0.14
RAB5C-205ENST00000550013 DRD3P35462 400 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 NXPH1P58417 271 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 GCNT1Q02742 428 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 BNIP3Q12983 259 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 KLHL10Q6JEL2 608 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 EHBP1Q8NDI1 1231 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 DHTKD1Q96HY7 919 aaPredicted RBP15.91■□□□□ 0.14
RAB5C-205ENST00000550013 SLC4A5Q9BY07 1137 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 GDF3Q9NR23 364 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 TJP2Q9UDY2 1190 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 MAN1B1Q9UKM7 699 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 PCDHGA1Q9Y5H4 931 aa15.91■□□□□ 0.14
RAB5C-205ENST00000550013 E5RJQ4 531 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 TLR4O00206 839 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 P4HA2O15460 535 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 TRUB2O95900 331 aaKnown RBP15.9■□□□□ 0.14
RAB5C-205ENST00000550013 IGLV3-25P01717 112 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 JUPP14923 745 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 ACADSBP45954 432 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 ACADVLP49748 655 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 NUCB2P80303 420 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 CETN1Q12798 172 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 STIM1Q13586 685 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 TAF5Q15542 800 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 TTI2Q6NXR4 508 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.9■□□□□ 0.14
RAB5C-205ENST00000550013 BEND5Q7L4P6 421 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 CCAR2Q8N163 923 aaKnown RBP15.9■□□□□ 0.14
RAB5C-205ENST00000550013 BTN2A3PQ96KV6 586 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 GTPBP4Q9BZE4 634 aaKnown RBP15.9■□□□□ 0.14
RAB5C-205ENST00000550013 INTS2Q9H0H0 1204 aaKnown RBP15.9■□□□□ 0.14
RAB5C-205ENST00000550013 ACP6Q9NPH0 428 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 CNTN6Q9UQ52 1028 aa15.9■□□□□ 0.14
RAB5C-205ENST00000550013 TBC1D3DA0A087WVF3 549 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3IA0A087WXS9 549 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3EA0A087X179 549 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3KA0A087X1G2 549 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 GOLGA6L4A6NEF3 574 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3FA6NER0 549 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3LB9A6J9 549 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 E9PAM4 449 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 F5H5T6 163 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 YKT6O15498 198 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 LATO43561 262 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 RTN2O75298 545 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 LETM1O95202 739 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3HP0C7X1 549 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 MAT2AP31153 395 aaKnown RBP15.89■□□□□ 0.13
RAB5C-205ENST00000550013 ARRB1P49407 418 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-205ENST00000550013 KCNH2Q12809 1159 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 ELAVL3Q14576 367 aaKnown RBP15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3GQ6DHY5 549 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3CQ6IPX1 549 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 SPATS2Q86XZ4 545 aaKnown RBP15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TBC1D3Q8IZP1 549 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-205ENST00000550013 PIP4K2CQ8TBX8 421 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 FRS2Q8WU20 508 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 NELFBQ8WX92 580 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 TSC1Q92574 1164 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 NXPE2Q96DL1 559 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 PRMT1Q99873 361 aaKnown RBP15.89■□□□□ 0.13
RAB5C-205ENST00000550013 POPDC2Q9HBU9 364 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 CTNND2Q9UQB3 1225 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 KALRNO60229 2985 aa15.89■□□□□ 0.13
RAB5C-205ENST00000550013 PTPRQQ9UMZ3 2332 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 SYNJ2BP-COX16A0A087WUM0 186 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 KCNU1A8MYU2 1149 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 TLX3O43711 291 aaPredicted RBP15.88■□□□□ 0.13
RAB5C-205ENST00000550013 BMP6P22004 513 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 ITPKBP27987 946 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 HNF1BP35680 557 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 NNMTP40261 264 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 YWHAZP63104 245 aaKnown RBP15.88■□□□□ 0.13
RAB5C-205ENST00000550013 CENPCQ03188 943 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 TARDBPQ13148 414 aaKnown RBP eCLIP15.88■□□□□ 0.13
RAB5C-205ENST00000550013 EIF4EBP2Q13542 120 aaPredicted RBP15.88■□□□□ 0.13
RAB5C-205ENST00000550013 POM121L1PQ3SYA9 428 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 SLC45A4Q5BKX6 768 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 HES3Q5TGS1 186 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 SFMBT2Q5VUG0 894 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 NAPEPLDQ6IQ20 393 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 CXorf57Q6NSI4 855 aaKnown RBP15.88■□□□□ 0.13
RAB5C-205ENST00000550013 KANSL1Q7Z3B3 1105 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 TRIM59Q8IWR1 403 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 ATP6V0D2Q8N8Y2 350 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 STK32AQ8WU08 396 aa15.88■□□□□ 0.13
RAB5C-205ENST00000550013 TIGD1Q96MW7 591 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms