RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 RNF219Q5W0B1 726 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 LYSMD4Q5XG99 296 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 ACAD10Q6JQN1 1059 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 ARCQ7LC44 396 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 MCOLN2Q8IZK6 566 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 STK40Q8N2I9 435 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 CCDC185Q8N715 623 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 MSANTD4Q8NCY6 345 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 OR2I1PQ8NGU4 316 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 PRCCQ92733 491 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 TOE1Q96GM8 510 aaKnown RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 HSPA12BQ96MM6 686 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 GPR174Q9BXC1 333 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 TRIM7Q9C029 511 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 HAUS4Q9H6D7 363 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 VPS45Q9NRW7 570 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 WSB2Q9NYS7 404 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-229ENST00000549883 IFNKQ9P0W0 207 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF212Q9UDV6 495 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 SERGEFQ9UGK8 458 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 PILRBQ9UKJ0 227 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 ACTL7AQ9Y615 435 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 KNL1Q8NG31 2342 aa10.07□□□□□ -0.8
HDAC7-229ENST00000549883 TP53BP1Q12888 1972 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 CNOT1A5YKK6 2376 aaKnown RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 IGLV3-10A0A075B6K4 115 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 SIGLEC16A6NMB1 481 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 E9PAM4 449 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 K7ERQ8 282 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 PLK4O00444 970 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ZBTB24O43167 697 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 CCP110O43303 1012 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF217O75362 1048 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 MT-CO1P00395 513 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 F9P00740 461 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ASLP04424 464 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 CALB1P05937 261 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 PLEKP08567 350 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 TNFAIP3P21580 790 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 GPD1P21695 349 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ACSL1P33121 698 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ADRA1BP35368 520 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 PTPN9P43378 593 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 PLK1P53350 603 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 CDH4P55283 916 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 GSCP56915 257 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 UBASH3AP57075 661 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF177Q13360 481 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 BYSLQ13895 437 aaKnown RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 STPG1Q5TH74 334 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 MANEALQ5VSG8 457 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 SFMBT2Q5VUG0 894 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 HGSNATQ68CP4 663 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 LINGO4Q6UY18 593 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 SND1Q7KZF4 910 aaKnown RBP eCLIP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 METTL3Q86U44 580 aaKnown RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 C11orf74Q86VG3 221 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 PYROXD2Q8N2H3 581 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 C12orf50Q8NA57 414 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 C3orf20Q8ND61 904 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 OR7D4Q8NG98 312 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 FRS2Q8WU20 508 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 FAM172AQ8WUF8 416 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 CENPIQ92674 756 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 PTPRN2Q92932 1015 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ZNF419Q96HQ0 510 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 C1orf74Q96LT6 269 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 MCEEQ96PE7 176 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 FAM129BQ96TA1 746 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 SELENOOQ9BVL4 669 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 RSPH9Q9H1X1 276 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 NDFIP2Q9NV92 336 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 AIPL1Q9NZN9 384 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 CDV3Q9UKY7 258 aaKnown RBP10.06□□□□□ -0.8
HDAC7-229ENST00000549883 MYO6Q9UM54 1294 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 NEU3Q9UQ49 428 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 TBC1D30Q9Y2I9 924 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 CACNA1EQ15878 2313 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 TMEM131Q92545 1883 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 ITIH6Q6UXX5 1313 aa10.06□□□□□ -0.8
HDAC7-229ENST00000549883 MED19A0JLT2 244 aaPredicted RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 C4orf47A7E2U8 309 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 PRR5-ARHGAP8B1AHC4 643 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 CDX4O14627 284 aaPredicted RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 SLC30A4O14863 429 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 TM4SF5O14894 197 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 AP5Z1O43299 807 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 SMAD6O43541 496 aaKnown RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 NDUFS2O75306 463 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 CLDN11O75508 207 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 MOCS3O95396 460 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 IGLV3-19P01714 112 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 SRPRAP08240 638 aaKnown RBP10.05□□□□□ -0.8
HDAC7-229ENST00000549883 C7P10643 843 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 SDC4P31431 198 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 PRKCIP41743 596 aa10.05□□□□□ -0.8
HDAC7-229ENST00000549883 ST8SIA6P61647 398 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms