RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ZNF280DQ6N043 979 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 TRPM8Q7Z2W7 1104 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 SCAMP5Q8TAC9 235 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 ZNF75CPQ92670 426 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-206ENST00000549505 CASP10Q92851 521 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 RXFP1Q9HBX9 757 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 KCNK9Q9NPC2 374 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 TBK1Q9UHD2 729 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-206ENST00000549505 DNAJC6O75061 913 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 KIAA0754O94854 1291 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 CSH1P0DML2 217 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 CSH2P0DML3 217 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 CCNB1P14635 433 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 RHOQP17081 205 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 PSMB4P28070 264 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 MGAT5Q09328 741 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 IFRD2Q12894 506 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-206ENST00000549505 ZBTB17Q13105 803 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 CRYMQ14894 314 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 TCTN1Q2MV58 587 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 BTBD8Q5XKL5 378 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 KYAT3Q6YP21 454 aaKnown RBP10.22□□□□□ -0.77
RAB5B-206ENST00000549505 TRIM42Q8IWZ5 723 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 OTUD6BQ8N6M0 293 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 IL22Q9GZX6 179 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.22□□□□□ -0.77
RAB5B-206ENST00000549505 SOX13Q9UN79 622 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 CHD5Q8TDI0 1954 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 FOXO6A8MYZ6 492 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 F8W810 466 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 PAGE1O75459 146 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 TUBP50607 506 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 CSE1LP55060 971 aaKnown RBP10.22□□□□□ -0.77
RAB5B-206ENST00000549505 GRTP1Q5TC63 336 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 ANKS3Q6ZW76 656 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 TCP10LQ8TDR4 215 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 C7orf26Q96N11 449 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 CPNE1Q99829 537 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 KIF9Q9HAQ2 790 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 RC3H2Q9HBD1 1191 aaKnown RBP10.22□□□□□ -0.77
RAB5B-206ENST00000549505 FGFR1OP2Q9NVK5 253 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 NSMCE4AQ9NXX6 385 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 MTRRQ9UBK8 725 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 DNAJB4Q9UDY4 337 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 AAR2Q9Y312 384 aaKnown RBP10.22□□□□□ -0.77
RAB5B-206ENST00000549505 PCDHB7Q9Y5E2 793 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 HS3ST4Q9Y661 456 aa10.22□□□□□ -0.77
RAB5B-206ENST00000549505 MICAL3Q7RTP6 2002 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 ZBTB24O43167 697 aaPredicted RBP10.21□□□□□ -0.77
RAB5B-206ENST00000549505 CREB3O43889 395 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 RASSF9O75901 435 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 GSRP00390 522 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 GALTP07902 379 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 AP1B1Q10567 949 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 SLC39A12Q504Y0 691 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 CNTD1Q8N815 330 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.77
RAB5B-206ENST00000549505 C10orf82Q8WW14 230 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 VWCEQ96DN2 955 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 SIKE1Q9BRV8 207 aa10.21□□□□□ -0.77
RAB5B-206ENST00000549505 UBE2OQ9C0C9 1292 aaKnown RBP10.21□□□□□ -0.77
RAB5B-206ENST00000549505 NOL6Q9H6R4 1146 aaKnown RBP10.21□□□□□ -0.77
RAB5B-206ENST00000549505 HBS1LQ9Y450 684 aaKnown RBP10.21□□□□□ -0.77
RAB5B-206ENST00000549505 TTC3P53804 2025 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 A0A1W2PQH9 124 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 MTMR11A4FU01 709 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 TRAFD1O14545 582 aaPredicted RBP10.21□□□□□ -0.78
RAB5B-206ENST00000549505 SNNO75324 88 aaPredicted RBP10.21□□□□□ -0.78
RAB5B-206ENST00000549505 POLBP06746 335 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 CA4P22748 312 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 GRIK1P39086 918 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 GRIA1P42261 906 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 SLC11A1P49279 550 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 PGFP49763 221 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 IFT88Q13099 833 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 MSLNQ13421 630 aaPredicted RBP10.21□□□□□ -0.78
RAB5B-206ENST00000549505 DENND5AQ6IQ26 1287 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 LVRNQ6Q4G3 990 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 PACS1Q6VY07 963 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 CCDC121Q6ZUS5 278 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 ASRGL1Q7L266 308 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 ZNF296Q8WUU4 475 aaPredicted RBP10.21□□□□□ -0.78
RAB5B-206ENST00000549505 EDEM1Q92611 657 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 MYRFLQ96LU7 910 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 ELAC2Q9BQ52 826 aaKnown RBP10.21□□□□□ -0.78
RAB5B-206ENST00000549505 GEMIN8Q9NWZ8 242 aaKnown RBP10.21□□□□□ -0.78
RAB5B-206ENST00000549505 DOCK4Q8N1I0 1966 aa10.21□□□□□ -0.78
RAB5B-206ENST00000549505 CFAP73A6NFT4 308 aa10.2□□□□□ -0.78
RAB5B-206ENST00000549505 E9PAM4 449 aa10.2□□□□□ -0.78
RAB5B-206ENST00000549505 C2CD2LO14523 706 aa10.2□□□□□ -0.78
RAB5B-206ENST00000549505 ALDH2P05091 517 aa10.2□□□□□ -0.78
RAB5B-206ENST00000549505 VIMP08670 466 aaKnown RBP10.2□□□□□ -0.78
RAB5B-206ENST00000549505 GBP2P32456 591 aaPredicted RBP10.2□□□□□ -0.78
RAB5B-206ENST00000549505 LRRC14Q15048 493 aa10.2□□□□□ -0.78
RAB5B-206ENST00000549505 HP1BP3Q5SSJ5 553 aaPredicted RBP10.2□□□□□ -0.78
RAB5B-206ENST00000549505 NAPEPLDQ6IQ20 393 aa10.2□□□□□ -0.78
RAB5B-206ENST00000549505 TRMT10BQ6PF06 316 aaKnown RBP10.2□□□□□ -0.78
RAB5B-206ENST00000549505 CLEC14AQ86T13 490 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms