RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 EEF2KO00418 725 aaKnown RBP12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 SPTLC1O15269 473 aa12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 PIGNO95427 931 aa12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 TKTP29401 623 aaKnown RBP12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 INCA1Q0VD86 236 aa12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 CMPK2Q5EBM0 449 aa12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 FBXL19Q6PCT2 694 aa12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 BFARQ9NZS9 450 aa12.66□□□□□ -0.38
SLC38A1-206ENST00000549049 KIF3CO14782 793 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 ZBTB24O43167 697 aaPredicted RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 GAS2O43903 313 aaKnown RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 XRCC1P18887 633 aaPredicted RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 FGFR3P22607 806 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 PMLP29590 882 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 MAGEA3P43357 314 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 CYTH1Q15438 398 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 CNGA3Q16281 694 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 APOBEC3FQ8IUX4 373 aaKnown RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 PCDH20Q8N6Y1 951 aaKnown RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 TTC16Q8NEE8 873 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 KCTD4Q8WVF5 259 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 PHF12Q96QT6 1004 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 SPATA16Q9BXB7 569 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 SIK2Q9H0K1 926 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 CYP4F12Q9HCS2 524 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 ADA2Q9NZK5 511 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 VANGL2Q9ULK5 521 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 CSPG5O95196 566 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 JCHAINP01591 159 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 SRGAP2BP0DMP2 458 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 UQCRBP14927 111 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 ZFXP17010 805 aaPredicted RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 RPS12P25398 132 aaKnown RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 ALDH1A3P47895 512 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 CDK7P50613 346 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 THOP1P52888 689 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 PLK1P53350 603 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 MAP3K7CLP57077 242 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 DEUP1Q05D60 604 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 NIPAL4Q0D2K0 466 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 ITGA7Q13683 1181 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 FLOT2Q14254 428 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 USP10Q14694 798 aaKnown RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 LRRC8BQ6P9F7 803 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 FBXW8Q8N3Y1 598 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 LRGUKQ96M69 825 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 NR1H4Q96RI1 486 aaPredicted RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 CAMKK2Q96RR4 588 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 NPAS2Q99743 824 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 GCOM2Q9BZD3 368 aaPredicted RBP12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 GRIP2Q9C0E4 1043 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 RBPJLQ9UBG7 517 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 TLK1Q9UKI8 766 aa12.65□□□□□ -0.38
SLC38A1-206ENST00000549049 RECQL4O94761 1208 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 ERCC2P18074 760 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 TSPAN8P19075 237 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 HDCP19113 662 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 POU5F1BQ06416 359 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 BST2Q10589 180 aaKnown RBP12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 CTBP1Q13363 440 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 NRF1Q16656 503 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 URGCPQ8TCY9 931 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 RNF34Q969K3 372 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 MPHOSPH6Q99547 160 aaKnown RBP12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 FERMT1Q9BQL6 677 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 SUDS3Q9H7L9 328 aaPredicted RBP12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 NMRAL1Q9HBL8 299 aa12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 RUVBL2Q9Y230 463 aaKnown RBP12.65□□□□□ -0.39
SLC38A1-206ENST00000549049 NEMP2A6NFY4 417 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 H3BRB1 525 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 IL1BP01584 269 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 PIK3R1P27986 724 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 SPRP35270 261 aaPredicted RBP12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 FDFT1P37268 417 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 MPP3Q13368 585 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 ART3Q13508 389 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 LSM12Q3MHD2 195 aaKnown RBP12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 ARL13AQ5H913 290 aaPredicted RBP12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 C6orf52Q5T4I8 152 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 ARMCX2Q7L311 632 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 OTOP3Q7RTS5 596 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 TRAPPC9Q96Q05 1148 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 CDH19Q9H159 772 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 TUT1Q9H6E5 874 aaKnown RBP12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 C15orf38-AP3S2A0A0A6YYH1 394 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 TRIM13O60858 407 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 GRK2P25098 689 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 NMBRP28336 390 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 RANBP1P43487 201 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 GRIA4P48058 902 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 GRM3Q14832 879 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 POU6F1Q14863 301 aa12.64□□□□□ -0.39
SLC38A1-206ENST00000549049 TLR1Q15399 786 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms