RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 CPSF7Q8N684 471 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 LINC01465Q8N7H1 131 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 ANKRD52Q8NB46 1076 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 ADCY4Q8NFM4 1077 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 RDH11Q8TC12 318 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 RNF217Q8TC41 542 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 MAPK15Q8TD08 544 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 LRGUKQ96M69 825 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 OR52B2Q96RD2 323 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 OXCT2Q9BYC2 517 aaPredicted RBP10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 NMRAL1Q9HBL8 299 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 OXSMQ9NWU1 459 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 PTTG2Q9NZH5 202 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 ATXN10Q9UBB4 475 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 RAP2CQ9Y3L5 183 aa10.1□□□□□ -0.79
SMARCD1-205ENST00000548573 PLXNA1Q9UIW2 1896 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 HDAC3O15379 428 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 TIMM44O43615 452 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 CAPN15O75808 1086 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 CLPTM1O96005 669 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 TFAP2AP05549 437 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 PMLP29590 882 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 GRM5P41594 1212 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 MATKP42679 507 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 CSE1LP55060 971 aaKnown RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ADGRE1Q14246 886 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 CNGA3Q16281 694 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ZNF423Q2M1K9 1284 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 PABPC1LQ4VXU2 614 aaKnown RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 LRRC23Q53EV4 343 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 PIGGQ5H8A4 983 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ARMC3Q5W041 872 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ZNF772Q68DY9 489 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 BNC2Q6ZN30 1099 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 TICAM1Q8IUC6 712 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ALDH16A1Q8IZ83 802 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 DSELQ8IZU8 1212 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 AHI1Q8N157 1196 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 PYROXD2Q8N2H3 581 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 B4GALNT2Q8NHY0 566 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 URGCPQ8TCY9 931 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 DLG3Q92796 817 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ZNF669Q96BR6 464 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 HSFY1Q96LI6 401 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 UBE2OQ9C0C9 1292 aaKnown RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 DRC3Q9H069 523 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ZCWPW1Q9H0M4 648 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 PLEKHA5Q9HAU0 1116 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 PPP1R1BQ9UD71 204 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 TMCO1Q9UM00 188 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 TRIP11Q15643 1979 aa10.09□□□□□ -0.79
SMARCD1-205ENST00000548573 ZCWPW2A0A1B0GU75 182 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 BTBD19C9JJ37 291 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 SLCO1B7G3V0H7 640 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 AIM2O14862 343 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 STRNO43815 780 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 CREB3O43889 395 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 TSPAN1O60635 241 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 TNFAIP8O95379 198 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 C2P06681 752 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 LCP1P13796 627 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 INSRRP14616 1297 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 SERPINB5P36952 375 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 GMPRP36959 345 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 HADHAP40939 763 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 HSPA13P48723 471 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 RPL14P50914 215 aaKnown RBP10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 FLOT2Q14254 428 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 HERC3Q15034 1050 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 USP41Q3LFD5 358 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 SLC25A52Q3SY17 297 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 CES3Q6UWW8 571 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 LCA5Q86VQ0 697 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 FAM131BQ86XD5 332 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 SNX32Q86XE0 403 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 PGAM4Q8N0Y7 254 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 LRRC52Q8N7C0 313 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 OR6B3Q8NGW1 331 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 FAM81AQ8TBF8 368 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 RNF139Q8WU17 664 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 HIC2Q96JB3 615 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 GATA5Q9BWX5 397 aaPredicted RBP10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 MRPS26Q9BYN8 205 aaKnown RBP10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 CEP41Q9BYV8 373 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 PRDM12Q9H4Q4 367 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 ZNF385DQ9H6B1 395 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 ZNF696Q9H7X3 374 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 CLIC5Q9NZA1 410 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 BFARQ9NZS9 450 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 PIM2Q9P1W9 311 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 RIMS3Q9UJD0 308 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 VANGL2Q9ULK5 521 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 EVPLQ92817 2033 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 MAGEB16A2A368 324 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 VILLO15195 856 aa10.08□□□□□ -0.8
SMARCD1-205ENST00000548573 TADA2AO75478 443 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms