RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 PPP3CBP16298 524 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 DNAJB1P25685 340 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 CD6P30203 668 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 TECP42680 631 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 MRPS35P82673 323 aaKnown RBP4.8□□□□□ -1.64
CBX5-203ENST00000547872 ITIH3Q06033 890 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 DMWDQ09019 674 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 FOXI1Q12951 378 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 GBX1Q14549 363 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 IQCB1Q15051 598 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 LY6KQ17RY6 165 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 KIAA0753Q2KHM9 967 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 ERCC6LQ2NKX8 1250 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 RBM20Q5T481 1227 aaKnown RBP4.8□□□□□ -1.64
CBX5-203ENST00000547872 PLPP4Q5VZY2 271 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 LMBRD2Q68DH5 695 aaPredicted RBP4.8□□□□□ -1.64
CBX5-203ENST00000547872 VWA1Q6PCB0 445 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 DARS2Q6PI48 645 aaKnown RBP4.8□□□□□ -1.64
CBX5-203ENST00000547872 WDR63Q8IWG1 891 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 FAM9BQ8IZU0 186 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 SMRP1Q8NCR6 262 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 IL31RAQ8NI17 732 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 PPP2R3CQ969Q6 453 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 FBXL20Q96IG2 436 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 CCDC136Q96JN2 1154 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 MSLNLQ96KJ4 702 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 CTAGE1Q96RT6 745 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 SPATA5L1Q9BVQ7 753 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 TRIM54Q9BYV2 358 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 TPSD1Q9BZJ3 242 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 CYP39A1Q9NYL5 469 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.8□□□□□ -1.64
CBX5-203ENST00000547872 XPR1Q9UBH6 696 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 TPCN1Q9ULQ1 816 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 L1RE1Q9UN81 338 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 TNNQ9UQP3 1299 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 SLC4A4Q9Y6R1 1079 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 PIEZO1Q92508 2521 aa4.8□□□□□ -1.64
CBX5-203ENST00000547872 A6NNZ2 444 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 C2CD4DB7Z1M9 353 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 TPP1O14773 563 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 NCK2O43639 380 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 ORC4O43929 436 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 MGEA5O60502 916 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 SURF6O75683 361 aaKnown RBP4.79□□□□□ -1.64
CBX5-203ENST00000547872 ZBED1O96006 694 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 CXCL10P02778 98 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 MMP1P03956 469 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 CXCR5P32302 372 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 SLC16A2P36021 539 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 MPLP40238 635 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 FOLR3P41439 243 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 VIPR2P41587 438 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 SLC11A2P49281 568 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 GATMP50440 423 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 TOB1P50616 345 aaPredicted RBP4.79□□□□□ -1.64
CBX5-203ENST00000547872 STAT2P52630 851 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 UCP3P55916 312 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 LOXL3P58215 753 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 FAM193AP78312 1265 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 HTRA4P83105 476 aaPredicted RBP4.79□□□□□ -1.64
CBX5-203ENST00000547872 SLC13A2Q13183 592 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 RAB32Q13637 225 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 BAATQ14032 418 aaPredicted RBP4.79□□□□□ -1.64
CBX5-203ENST00000547872 LPAL2Q16609 132 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 SLC44A4Q53GD3 710 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 RNF220Q5VTB9 566 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 SWSAP1Q6NVH7 229 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 TMEM108Q6UXF1 575 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 AACSQ86V21 672 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 MPP5Q8N3R9 675 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 FAM156AQ8NDB6 213 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 VN1R2Q8NFZ6 395 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 MYCBPAPQ8TBZ2 947 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 ACTRT2Q8TDY3 377 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 POF1BQ8WVV4 589 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 LRTOMTQ8WZ04 291 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 SEPT8Q92599 483 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 PGBD1Q96JS3 809 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 OSBPL9Q96SU4 736 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 SEZ6LQ9BYH1 1024 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 C22orf23Q9BZE7 217 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 TLE6Q9H808 572 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 ATP6V0A4Q9HBG4 840 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 IL1RAPL2Q9NP60 686 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 FEM1BQ9UK73 627 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 CA14Q9ULX7 337 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.79□□□□□ -1.64
CBX5-203ENST00000547872 PAXBP1Q9Y5B6 917 aa4.79□□□□□ -1.64
CBX5-203ENST00000547872 SCN10AQ9Y5Y9 1956 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 GREB1LQ9C091 1923 aaPredicted RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 BTN3A1O00481 513 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 PROM1O43490 865 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 DCNP07585 359 aaKnown RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 CHRM2P08172 466 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 GHRP10912 638 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 XRCC6P12956 609 aaKnown RBP eCLIP4.78□□□□□ -1.64
CBX5-203ENST00000547872 BRAFP15056 766 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 MCCP23508 829 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 ADRA1BP35368 520 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms