RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	CCL22	O00626	93 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	RECQL4	O94761	1208 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	DDN	O94850	711 aa	Predicted RBP	13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	VAPB	O95292	243 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	ITGAX	P20702	1163 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	FBXO48	Q5FWF7	155 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	PITRM1	Q5JRX3	1037 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	NCBP2-AS2	Q69YL0	99 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	GALNT15	Q8N3T1	639 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	BEST2	Q8NFU1	509 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	SPATA22	Q8NHS9	363 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	TUT1	Q9H6E5	874 aa	Known RBP	13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	CCDC167	Q9P0B6	97 aa		13.27	□□□□□ -0.28
BRF1-210	ENST00000547374	ABLIM1	O14639	778 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	PFDN1	O60925	122 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	FKBP6	O75344	327 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	ETFB	P38117	255 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	SNX16	P57768	344 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	CCNI	Q14094	377 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	OTOP3	Q7RTS5	596 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	SLC41A1	Q8IVJ1	513 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	GATA5	Q9BWX5	397 aa	Predicted RBP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	CAAP1	Q9H8G2	361 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	CDHR5	Q9HBB8	845 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	FETUB	Q9UGM5	382 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	FAM72C	H0Y354	149 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	ZBTB24	O43167	697 aa	Predicted RBP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	XRCC1	P18887	633 aa	Predicted RBP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	RAB27A	P51159	221 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	RAP1GDS1	P52306	607 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	RALGDS	Q12967	914 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	MAP7	Q14244	749 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	PRPSAP1	Q14558	356 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	DGKD	Q16760	1214 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	FAM72A	Q5TYM5	149 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	TWF2	Q6IBS0	349 aa	Known RBP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	FAM72D	Q6L9T8	149 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	MARK2	Q7KZI7	788 aa	Known RBP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	MAVS	Q7Z434	540 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	AMIGO2	Q86SJ2	522 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	FAM72B	Q86X60	149 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	MYLK4	Q86YV6	388 aa	Predicted RBP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	TRIML2	Q8N7C3	387 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	B4GALNT2	Q8NHY0	566 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	RNF217	Q8TC41	542 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	GATA6	Q92908	595 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	EMID1	Q96A84	441 aa	Predicted RBP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	LENG1	Q96BZ8	264 aa	Predicted RBP	13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	NDN	Q99608	321 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	ZNF670	Q9BS34	389 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	RNF39	Q9H2S5	420 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	PCDHGB4	Q9UN71	923 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	PCDHGB5	Q9Y5G0	923 aa		13.27	□□□□□ -0.29
BRF1-210	ENST00000547374	DYNC1LI2	O43237	492 aa	Predicted RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	TRIM13	O60858	407 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	CLPTM1	O96005	669 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ERCC2	P18074	760 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	IGFBP6	P24592	240 aa	Predicted RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	GRIA4	P48058	902 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	RBM44	Q6ZP01	1051 aa	Known RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ACAD11	Q709F0	780 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	KCNMB4	Q86W47	210 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	MTMR14	Q8NCE2	650 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	APPL2	Q8NEU8	664 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	URGCP	Q8TCY9	931 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	AURKC	Q9UQB9	309 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	SNX13	Q9Y5W8	968 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	CDY2A	Q9Y6F7	541 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	CDY1	Q9Y6F8	540 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	KPNA7	A9QM74	516 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	BUD23	O43709	281 aa	Known RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	USP17L7	P0C7H9	530 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ZFX	P17010	805 aa	Predicted RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	PGAM1	P18669	254 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	NFKB1	P19838	968 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	THOP1	P52888	689 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ARL13A	Q5H913	290 aa	Predicted RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	PRAMEF19	Q5SWL8	479 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	SEL1L3	Q68CR1	1132 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	DENND6A	Q8IWF6	608 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	DCPS	Q96C86	337 aa	Known RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	KCNK16	Q96T55	309 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	PCDHAC1	Q9H158	963 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	PIF1	Q9H611	641 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ZNF180	Q9UJW8	692 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	MT-CYB	P00156	380 aa	Predicted RBP	13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	TGFB3	P10600	412 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ICAM3	P32942	547 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	TKTL1	P51854	596 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	MAPK10	P53779	464 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ARPIN	Q7Z6K5	226 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ELMO2	Q96JJ3	720 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	ASB7	Q9H672	318 aa		13.26	□□□□□ -0.29
BRF1-210	ENST00000547374	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms