RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 GUCY1A3Q02108 690 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 RBM43Q6ZSC3 357 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SLC22A9Q8IVM8 553 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SUGP1Q8IWZ8 645 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 PRKD2Q9BZL6 878 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SCHIP1Q9P0W5 487 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 GNPTGQ9UJJ9 305 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 RNF103-CHMP3A0A140T963 221 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 A0A1W2PQ45 241 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 A0A1W2PQY0 241 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 DGKIO75912 1065 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 RBP1P09455 135 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 LYPLAL1Q5VWZ2 237 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 BSNDQ8WZ55 320 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 PADI4Q9UM07 663 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 MYH1P12882 1939 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 DDX60Q8IY21 1712 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 KLHL2O95198 593 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 FUT11Q495W5 492 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 MPPE1Q53F39 396 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 CCDC92Q53HC0 331 aaPredicted RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 KCNT2Q6UVM3 1135 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 CPNE1Q99829 537 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 TM6SF2Q9BZW4 377 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 CREBZFQ9NS37 354 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 TBC1D14Q9P2M4 693 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SHOC2Q9UQ13 582 aa9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 RRP15Q9Y3B9 282 aaKnown RBP9.22□□□□□ -0.93
MTHFD1-202ENST00000545908 SMIM28A0A1B0GU29 152 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 CPSF4O95639 269 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 HPGDP15428 266 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 TYMPP19971 482 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 ALDH9A1P49189 494 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 SLC51AQ86UW1 340 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 ACTL9Q8TC94 416 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 FAM111AQ96PZ2 611 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 ACOX2Q99424 681 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 DNAJC18Q9H819 358 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 C10orf71Q711Q0 1435 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 PTPRJQ12913 1337 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 PJA2O43164 708 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 CORO1AP31146 461 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 CAPZA2P47755 286 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 PRPF39Q86UA1 669 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 SLC9A9Q8IVB4 645 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 CFAP52Q8N1V2 620 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF296Q8WUU4 475 aaPredicted RBP9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 SGSM3Q96HU1 749 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 UNKQ9C0B0 810 aaKnown RBP9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 ILKAPQ9H0C8 392 aaPredicted RBP9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 BPIFA1Q9NP55 256 aa9.21□□□□□ -0.93
MTHFD1-202ENST00000545908 TMEM120BA0PK00 339 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 DDX3XO00571 662 aaKnown RBP eCLIP9.21□□□□□ -0.941e-15■■■■□ 20.8
MTHFD1-202ENST00000545908 EIF3HO15372 352 aaKnown RBP eCLIP9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 RPSAP08865 295 aaKnown RBP9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 CCDC159P0C7I6 412 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 MAPK8P45983 427 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ERVK-21P61565 698 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 MGAT5Q09328 741 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 HIBCHQ6NVY1 386 aaPredicted RBP9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 CHST9Q7L1S5 443 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 KAT5Q92993 513 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 TUBGCP3Q96CW5 907 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 REPS1Q96D71 796 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 PNMA8BQ9ULN7 279 aaPredicted RBP9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 MTO1Q9Y2Z2 717 aaKnown RBP9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ERI2A8K979 691 aaKnown RBP9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 KATNA1O75449 491 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 SKAP2O75563 359 aaPredicted RBP9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ERBB2P04626 1255 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 CYP1A2P05177 515 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 TPBGLP0DKB5 382 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 MDH1P40925 334 aaKnown RBP9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ABL2P42684 1182 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 PRIM2P49643 509 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ARSHQ5FYA8 562 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 WDR59Q6PJI9 974 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 MON1AQ86VX9 555 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ZNF555Q8NEP9 628 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ZFP42Q96MM3 310 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 FERD3LQ96RJ6 166 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 VAT1Q99536 393 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 MRGBPQ9NV56 204 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 SNX5Q9Y5X3 404 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ZNF536O15090 1300 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ITGB4P16144 1822 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 AIM2O14862 343 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 B4GALT4O60513 344 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 TLE2Q04725 743 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 TAF10Q12962 218 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 PARP6Q2NL67 630 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 PDPK2PQ6A1A2 396 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 SCARA3Q6AZY7 606 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 C11orf74Q86VG3 221 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 ZNF614Q8N883 585 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 B4GALNT2Q8NHY0 566 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 CXorf40BQ96DE9 158 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 MCRS1Q96EZ8 462 aa9.21□□□□□ -0.94
MTHFD1-202ENST00000545908 MIEF1Q9NQG6 463 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms