RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 TDP2O95551 362 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 SERPINA3P01011 423 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 AP3M2P53677 418 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 MTMR1Q13613 665 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 SPESP1Q6UW49 350 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 GALNT12Q8IXK2 581 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 OFCC1Q8IZS5 231 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 MSANTD3Q96H12 275 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 ACOX2Q99424 681 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 TRPM5Q9NZQ8 1165 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 MED11Q9P086 117 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 NAGPAQ9UK23 515 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 LRFN2Q9ULH4 789 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 BARX2Q9UMQ3 279 aaPredicted RBP8.77□□□□□ -1
ATXN3-216ENST00000545170 GRIP1Q9Y3R0 1128 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 LYVE1Q9Y5Y7 322 aa8.77□□□□□ -1
ATXN3-216ENST00000545170 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 M0R036 132 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TOR1BO14657 336 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 AP2A2O94973 939 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PSKH1P11801 424 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 VARSP26640 1264 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 YWHAQP27348 245 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 FAUP35544 74 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 DUOXA2Q1HG44 320 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 DNAJC14Q6Y2X3 702 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 MBOAT7Q96N66 472 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 AIFM2Q9BRQ8 373 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 MAFFQ9ULX9 164 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 SORCS3Q9UPU3 1222 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 ZNF451Q9Y4E5 1061 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 C12orf71A8MTZ7 269 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 STX16-NPEPL1H3BU86 382 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 STX16O14662 325 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 VAPBO95292 243 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TFRCP02786 760 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 RARBP10826 455 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 RPS2P15880 293 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 CD40LGP29965 261 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 CDK9P50750 372 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 AP2S1P53680 142 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PRKAA2P54646 552 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 MGAT5Q09328 741 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PON2Q15165 354 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PKN1Q16512 942 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TMC7Q7Z402 723 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PALB2Q86YC2 1186 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TOP1MTQ969P6 601 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 CCDC17Q96LX7 622 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 VPS35Q96QK1 796 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 CHCHD6Q9BRQ6 235 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 LACRTQ9GZZ8 138 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 NOL11Q9H8H0 719 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 MKLN1Q9UL63 735 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TEX14Q8IWB6 1497 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 GNG14A0A1W2PPG7 69 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 ORC5O43913 435 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 AZGP1P25311 298 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 ACADLP28330 430 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PSME3P61289 254 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 RPP38P78345 283 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 AMPD2Q01433 879 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 FAAP100Q0VG06 881 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 SKIV2LQ15477 1246 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PTPN20Q4JDL3 420 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 FAM126BQ8IXS8 530 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TRPV3Q8NET8 790 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TNIP3Q96KP6 325 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 LXNQ9BS40 222 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TRIM62Q9BVG3 475 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 RIOK2Q9BVS4 552 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 MRPL4Q9BYD3 311 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TREM1Q9NP99 234 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 CCNB1IP1Q9NPC3 277 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 CCDC177Q9NQR7 707 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 BLOC1S4Q9NUP1 217 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PSMD12O00232 456 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 LTFP02788 710 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 GSCP56915 257 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 ARHGAP15Q53QZ3 475 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 DEPDC4Q8N2C3 294 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TTC39CQ8N584 583 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 SPERTQ8NA61 448 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 OR52K2Q8NGK3 314 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 LRRC40Q9H9A6 602 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 MID1IP1Q9NPA3 183 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 BARHL2Q9NY43 387 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 AKAP7Q9P0M2 348 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 TJP2Q9UDY2 1190 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 MTF2Q9Y483 593 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 ZMYM2Q9UBW7 1377 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 FAM86B2P0C5J1 330 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PRG2P13727 222 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 GPR1P46091 355 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 KCTD8Q6ZWB6 473 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 EEPD1Q7L9B9 569 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 PM20D2Q8IYS1 436 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 GATAD2BQ8WXI9 593 aa8.77□□□□□ -1.01
ATXN3-216ENST00000545170 MRPL9Q9BYD2 267 aaKnown RBP8.77□□□□□ -1.01
ATXN3-216ENST00000545170 EBF3Q9H4W6 596 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms