RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CASQ1P31415 396 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 HOXD12P35452 270 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 DPP6P42658 865 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PTGER3P43115 390 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 KIR2DL1P43626 348 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 NOP2P46087 812 aaKnown RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SLC6A11P48066 632 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 TUBP50607 506 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF143P52747 638 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 TERF1P54274 439 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 CACNA2D1P54289 1103 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 COPS2P61201 443 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 IRX4P78413 519 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PPP2R5EQ16537 467 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 WHAMMP3Q1A5X7 153 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 TRIM61Q5EBN2 209 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF569Q5MCW4 686 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 EOGTQ5NDL2 527 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 MEI1Q5TIA1 1274 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SNX30Q5VWJ9 437 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 DCUN1D2Q6PH85 259 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 KLHDC10Q6PID8 442 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SLC23A3Q6PIS1 610 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 RHBDF2Q6PJF5 856 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 LPCAT2Q7L5N7 544 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 STRADAQ7RTN6 431 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ZNF572Q7Z3I7 529 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 BNIPLQ7Z465 357 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 DAAM2Q86T65 1068 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 NT5DC3Q86UY8 548 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PIGZQ86VD9 579 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 DDX42Q86XP3 938 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SYT12Q8IV01 421 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PHTF2Q8N3S3 785 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 UBL4BQ8N7F7 174 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 TXNDC5Q8NBS9 432 aaKnown RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ARMC2Q8NEN0 867 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PDZD8Q8NEN9 1154 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 DEFB124Q8NES8 71 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PIGKQ92643 395 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 CENPIQ92674 756 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 C16orf45Q96MC5 204 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PNKPQ96T60 521 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 NAP1L3Q99457 506 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SMOQ99835 787 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 C11orf70Q9BRQ4 267 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SELENOOQ9BVL4 669 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SCNM1Q9BWG6 230 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 PACSIN1Q9BY11 444 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 LRRC4Q9HBW1 653 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 POLMQ9NP87 494 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ARHGEF4Q9NR80 690 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 KRT82Q9NSB4 513 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 FAM49BQ9NUQ9 324 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 TMEM74BQ9NUR3 256 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 TMEM30AQ9NV96 361 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SMPD4Q9NXE4 827 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 CLIC5Q9NZA1 410 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 CFAP97Q9P2B7 532 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 CYTH4Q9UIA0 394 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 MBD1Q9UIS9 605 aaPredicted RBP6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SALL4Q9UJQ4 1053 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ANAPC7Q9UJX3 599 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 AMFRQ9UKV5 643 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SNX12Q9UMY4 172 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 SCML2Q9UQR0 700 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 DUSP10Q9Y6W6 482 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 ANAPC1Q9H1A4 1944 aa6.82□□□□□ -1.32
CDCA3-209ENST00000544610 TNRC6BQ9UPQ9 1833 aaKnown RBP6.81□□□□□ -1.32
CDCA3-209ENST00000544610 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 TCRBV21S2A2A0A5A6 115 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 E2F8A0AVK6 867 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 MACROD2A1Z1Q3 448 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 C2CD4BA6NLJ0 364 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 TMCO5BA8MYB1 307 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 UPK3BL1B0FP48 263 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 UPK3BL2E5RIL1 263 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 E5RJQ4 531 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 SCAMP3O14828 347 aaKnown RBP6.81□□□□□ -1.32
CDCA3-209ENST00000544610 PAPSS1O43252 624 aaPredicted RBP6.81□□□□□ -1.32
CDCA3-209ENST00000544610 PRMT3O60678 531 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 PALMO75781 387 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 RNF8O76064 485 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 KLF8O95600 359 aaPredicted RBP6.81□□□□□ -1.32
CDCA3-209ENST00000544610 ZBED1O96006 694 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 ADH1CP00326 375 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 CCDC130P13994 396 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 ENGP17813 658 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 HTR7P34969 479 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 CTNNA1P35221 906 aaKnown RBP6.81□□□□□ -1.32
CDCA3-209ENST00000544610 NOS2P35228 1153 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 PTPN7P35236 360 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 CETN2P41208 172 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 GRIA2P42262 883 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 MATKP42679 507 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 TNFRSF4P43489 277 aa6.81□□□□□ -1.32
CDCA3-209ENST00000544610 NAP1L1P55209 391 aaKnown RBP6.81□□□□□ -1.32
CDCA3-209ENST00000544610 YWHAZP63104 245 aaKnown RBP6.81□□□□□ -1.32
CDCA3-209ENST00000544610 KDSRQ06136 332 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms