RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 ALG14Q96F25 216 aa11.04□□□□□ -0.64
CHEK1-218ENST00000544373 PCDHB18PQ96TA0 734 aa11.04□□□□□ -0.64
CHEK1-218ENST00000544373 TKTL2Q9H0I9 626 aa11.04□□□□□ -0.64
CHEK1-218ENST00000544373 RAB6CQ9H0N0 254 aa11.04□□□□□ -0.64
CHEK1-218ENST00000544373 ARHGEF38Q9NXL2 777 aa11.04□□□□□ -0.64
CHEK1-218ENST00000544373 TMEM63CQ9P1W3 806 aa11.04□□□□□ -0.64
CHEK1-218ENST00000544373 TMEM59LQ9UK28 342 aa11.04□□□□□ -0.64
CHEK1-218ENST00000544373 TNRC6BQ9UPQ9 1833 aaKnown RBP11.03□□□□□ -0.64
CHEK1-218ENST00000544373 A0A1B0GVM2 712 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 TCAF2A6NFQ2 919 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 LRRC10BA6NIK2 292 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 GJB6O95452 261 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 DNTTP04053 509 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 SRPRAP08240 638 aaKnown RBP11.03□□□□□ -0.64
CHEK1-218ENST00000544373 ATP1A3P13637 1013 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 PMLP29590 882 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 SOX5P35711 763 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 ATXN3P54252 364 aaPredicted RBP11.03□□□□□ -0.64
CHEK1-218ENST00000544373 CDR2Q01850 454 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 ARID5BQ14865 1188 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 SLC25A52Q3SY17 297 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 ALFQ53S48 1182 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 FKBP15Q5T1M5 1219 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 CCDC183Q5T5S1 534 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 ZNF776Q68DI1 518 aaPredicted RBP11.03□□□□□ -0.64
CHEK1-218ENST00000544373 PIP4P1Q86T03 277 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 MMAAQ8IVH4 418 aaKnown RBP11.03□□□□□ -0.64
CHEK1-218ENST00000544373 ZNF683Q8IZ20 524 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 EMC1Q8N766 993 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 KDM1BQ8NB78 822 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 SLC30A5Q8TAD4 765 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 PTPRN2Q92932 1015 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 CFAP57Q96MR6 1250 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 FEM1AQ9BSK4 669 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 WDCPQ9H6R7 721 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 OR51B4Q9Y5P0 310 aa11.03□□□□□ -0.64
CHEK1-218ENST00000544373 CACNA1BQ00975 2339 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 LGALS16A8MUM7 142 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 GOLGA6L22H0YM25 854 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 MID1O15344 667 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 GJB3O75712 270 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 MOCS3O95396 460 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 SEMA4FO95754 770 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 TOP3BO95985 862 aaKnown RBP11.02□□□□□ -0.64
CHEK1-218ENST00000544373 CYP1A1P04798 512 aaPredicted RBP11.02□□□□□ -0.64
CHEK1-218ENST00000544373 CD59P13987 128 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 GNSP15586 552 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 CSRP1P21291 193 aaKnown RBP11.02□□□□□ -0.64
CHEK1-218ENST00000544373 SCNN1AP37088 669 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 PLK1P53350 603 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 METAP1P53582 386 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 ZBTB16Q05516 673 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 DEUP1Q05D60 604 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 TYRO3Q06418 890 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 GRIK2Q13002 908 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 SEMA3BQ13214 749 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 C5orf22Q49AR2 442 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 BNIPLQ7Z465 357 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 RABEPKQ7Z6M1 372 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 STK40Q8N2I9 435 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 GANCQ8TET4 914 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 FRS2Q8WU20 508 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 SNX19Q92543 992 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 BIRC7Q96CA5 298 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 PGAP3Q96FM1 320 aaPredicted RBP11.02□□□□□ -0.64
CHEK1-218ENST00000544373 BTBD1Q9H0C5 482 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 NEUROG2Q9H2A3 272 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 PABPC3Q9H361 631 aaKnown RBP11.02□□□□□ -0.64
CHEK1-218ENST00000544373 FBRSQ9HAH7 460 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 IL21RQ9HBE5 538 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 FBXL12Q9NXK8 326 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 MPP6Q9NZW5 540 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 SUSD2Q9UGT4 822 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 STAP1Q9ULZ2 295 aa11.02□□□□□ -0.64
CHEK1-218ENST00000544373 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.02□□□□□ -0.64
CHEK1-218ENST00000544373 ITIH6Q6UXX5 1313 aa11.02□□□□□ -0.65
CHEK1-218ENST00000544373 KMT2BQ9UMN6 2715 aaPredicted RBP11.02□□□□□ -0.65
CHEK1-218ENST00000544373 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.01□□□□□ -0.65
CHEK1-218ENST00000544373 EDDM13A0A1B0GTR0 161 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 A0A1B0GTW7 788 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 A0A1W2PP55 124 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 TARSL2A2RTX5 802 aaKnown RBP11.01□□□□□ -0.65
CHEK1-218ENST00000544373 BCAT2O15382 392 aaPredicted RBP11.01□□□□□ -0.65
CHEK1-218ENST00000544373 OPHN1O60890 802 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 FSBPO95073 299 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 MT-CO1P00395 513 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 CEACAM1P13688 526 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 MMP8P22894 467 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 SLC8A1P32418 973 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 STAT1P42224 750 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 CSNK1EP49674 416 aaKnown RBP11.01□□□□□ -0.65
CHEK1-218ENST00000544373 FAM193AP78312 1265 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 UBXN1Q04323 297 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 ZNF252P-AS1Q0IIN9 211 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 ZNF177Q13360 481 aaPredicted RBP11.01□□□□□ -0.65
CHEK1-218ENST00000544373 SLC12A1Q13621 1099 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 CST6Q15828 149 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 BRMS1LQ5PSV4 323 aa11.01□□□□□ -0.65
CHEK1-218ENST00000544373 TTC39BQ5VTQ0 682 aaPredicted RBP11.01□□□□□ -0.65
CHEK1-218ENST00000544373 RNF219Q5W0B1 726 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms