RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 CACNG4Q9UBN1 327 aa13.19□□□□□ -0.3
TUBGCP2-210ENST00000543663 EGFL7Q9UHF1 273 aa13.19□□□□□ -0.3
TUBGCP2-210ENST00000543663 SPATA31C2B4DYI2 1134 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 MT-ND1P03886 318 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 HSMCR30P0CW71 290 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 PCNAP12004 261 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 CHRNB2P17787 502 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 WDR4P57081 412 aaKnown RBP13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 LSM3P62310 102 aaKnown RBP13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 DGCR6Q14129 220 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 ZC3H12BQ5HYM0 836 aaKnown RBP13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 FAM156AQ8NDB6 213 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 KCTD4Q8WVF5 259 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 RCN3Q96D15 328 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 ACOX2Q99424 681 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 DGCR6LQ9BY27 220 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 MID1IP1Q9NPA3 183 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 ARIH2O95376 493 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 HIST1H2AGP0C0S8 130 aaPredicted RBP13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 HSPA1AP0DMV8 641 aaKnown RBP13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 HSPA1BP0DMV9 641 aaKnown RBP13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 HIST1H2ADP20671 130 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 SLC6A3Q01959 620 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 BST2Q10589 180 aaKnown RBP13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 NR6A1Q15406 480 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 BBS12Q6ZW61 710 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 ADCK2Q7Z695 626 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 SLC9A9Q8IVB4 645 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 TMCO5AQ8N6Q1 288 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 DDHD1Q8NEL9 900 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 HIST1H2AHQ96KK5 128 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 HIST1H2AJQ99878 128 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 LPIN3Q9BQK8 851 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 H2AFJQ9BTM1 129 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 WDR41Q9HAD4 459 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 CDHR5Q9HBB8 845 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 HEATR9A2RTY3 570 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 SOWAHBA6NEL2 793 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 TMEM191CA6NGB0 347 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 PRPF4O43172 522 aaKnown RBP eCLIP13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 ATP6V1C1P21283 382 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 THPOP40225 353 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 GRIA3P42263 894 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 MAXP61244 160 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 GAD2Q05329 585 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 CYP51A1Q16850 503 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 C11orf96Q7Z7L8 435 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 GPC2Q8N158 579 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 DNAJB14Q8TBM8 379 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 GLMNQ92990 594 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 BBS2Q9BXC9 721 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 PHACTR1Q9C0D0 580 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 R3HDMLQ9H3Y0 253 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 TXNRD2Q9NNW7 524 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 CNTNAP2Q9UHC6 1331 aa13.18□□□□□ -0.3
TUBGCP2-210ENST00000543663 FARP2O94887 1054 aaPredicted RBP13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 SLC25A27O95847 323 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ALADP13716 330 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 PTGIRP43119 386 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 GDF10P55107 478 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 JAM2P57087 298 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 CHRNB3Q05901 458 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ATP6AP1LQ52LC2 224 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 SH3PXD2AQ5TCZ1 1133 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 SLC41A1Q8IVJ1 513 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 FIG4Q92562 907 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 KLHL25Q9H0H3 589 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 KCNK4Q9NYG8 393 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 MOXD2PA6NHM9 499 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 MMP8P22894 467 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 BDNFP23560 247 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 TBCCQ15814 346 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 DCBLD1Q8N8Z6 715 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 CPT1BQ92523 772 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 TEPSINQ96N21 525 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ZMAT2Q96NC0 199 aaKnown RBP13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 TKTL2Q9H0I9 626 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 GGA2Q9UJY4 613 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 KIAA1551Q9HCM1 1747 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 F8W8V4 182 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 PEX11AO75192 247 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 LRCH4O75427 683 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 RECQL4O94761 1208 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ASMTLO95671 621 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 PYGLP06737 847 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 PPP4R4Q6NUP7 873 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 LINC00523Q86TU6 105 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 UCMAQ8WVF2 138 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 TLCD1Q96CP7 247 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 CDT1Q9H211 546 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ABCG8Q9H221 673 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ALG9Q9H6U8 611 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ZNF212Q9UDV6 495 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ZMYM5Q9UJ78 669 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 TNRC6CQ9HCJ0 1690 aaKnown RBP13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 C16orf96A6NNT2 1141 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms