RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 KCTD11Q693B1 232 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 TMEM135Q86UB9 458 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 DNAAF3Q8N9W5 541 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 PPP4R1Q8TF05 950 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 GAD1Q99259 594 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 COLEC11Q9BWP8 271 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 TMEM30AQ9NV96 361 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 COPG2Q9UBF2 871 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.06■□□□□ 0.64
COPS7A-215ENST00000543155 CDY2AQ9Y6F7 541 aa19.06■□□□□ 0.64
COPS7A-215ENST00000543155 USP12O75317 370 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 PSMG1O95456 288 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 GCKP35557 465 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 LIMK2P53671 638 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 RCN1Q15293 331 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 PPM1JQ5JR12 505 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 C10orf107Q8IVU9 208 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 DCLK2Q8N568 766 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 RBM15BQ8NDT2 890 aaKnown RBP19.05■□□□□ 0.64
COPS7A-215ENST00000543155 STMN2Q93045 179 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 VAT1Q99536 393 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 MLPHQ9BV36 600 aaPredicted RBP19.05■□□□□ 0.64
COPS7A-215ENST00000543155 TMEM216Q9P0N5 145 aa19.05■□□□□ 0.64
COPS7A-215ENST00000543155 PCSK1P29120 753 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 CD68P34810 354 aaPredicted RBP19.04■□□□□ 0.64
COPS7A-215ENST00000543155 CXCR3P49682 368 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 ZBTB17Q13105 803 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 TUBB3Q13509 450 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 CCDC6Q16204 474 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 PAXIP1Q6ZW49 1069 aaPredicted RBP19.04■□□□□ 0.64
COPS7A-215ENST00000543155 BHLHA9Q7RTU4 235 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 STRA8Q7Z7C7 330 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 C3orf58Q8NDZ4 430 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 IRGQQ8WZA9 623 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 WDCPQ9H6R7 721 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 ST3GAL5Q9UNP4 418 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 ZCWPW2A0A1B0GU75 182 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 KRT36O76013 467 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 AOC1P19801 751 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 NPY2RP49146 381 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 CDK7P50613 346 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 KDSRQ06136 332 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 UBAP2LQ14157 1087 aaKnown RBP19.04■□□□□ 0.64
COPS7A-215ENST00000543155 TSNAXIP1Q2TAA8 658 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 ANKRD20A4Q4UJ75 823 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 CTU1Q7Z7A3 348 aaKnown RBP19.04■□□□□ 0.64
COPS7A-215ENST00000543155 WDR60Q8WVS4 1066 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 UPF1Q92900 1129 aaKnown RBP eCLIP19.04■□□□□ 0.64
COPS7A-215ENST00000543155 FAM161BQ96MY7 647 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 CHST12Q9NRB3 414 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 DNAJC28Q9NX36 388 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 PLA2G4CQ9UP65 541 aa19.04■□□□□ 0.64
COPS7A-215ENST00000543155 SHROOM3Q8TF72 1996 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 MAGEB16A2A368 324 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 PRR5-ARHGAP8B1AHC4 643 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 MPOP05164 745 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 RALBP11234 206 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 NFKB1P19838 968 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 RPL9P32969 192 aaKnown RBP19.03■□□□□ 0.64
COPS7A-215ENST00000543155 ARHGAP8P85298 464 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 CMC1Q7Z7K0 106 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 FBXO27Q8NI29 283 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 EDEM1Q92611 657 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 LPPQ93052 612 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 MYLPFQ96A32 169 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 PGLYRP2Q96PD5 576 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 SORT1Q99523 831 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 TKTL2Q9H0I9 626 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 C1orf21Q9H246 121 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 CSNK1G1Q9HCP0 422 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 MIOSQ9NXC5 875 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 OR12D3Q9UGF7 316 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 APOBEC2Q9Y235 224 aaKnown RBP19.03■□□□□ 0.64
COPS7A-215ENST00000543155 ARL5CA6NH57 179 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 CELF2O95319 508 aaKnown RBP19.03■□□□□ 0.64
COPS7A-215ENST00000543155 CPA3P15088 417 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 ATP6V1C1P21283 382 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 VHLP40337 213 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 RGS2P41220 211 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 ABCE1P61221 599 aaKnown RBP19.03■□□□□ 0.64
COPS7A-215ENST00000543155 RABGAP1LQ5R372 815 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 NET1Q7Z628 596 aaPredicted RBP19.03■□□□□ 0.64
COPS7A-215ENST00000543155 PLCD3Q8N3E9 789 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 GIT1Q9Y2X7 761 aa19.03■□□□□ 0.64
COPS7A-215ENST00000543155 F8W8V4 182 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 AP3B1O00203 1094 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 LIN7AO14910 233 aaPredicted RBP19.02■□□□□ 0.64
COPS7A-215ENST00000543155 CIB2O75838 187 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 TM7SF2O76062 418 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 KLHL2O95198 593 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 ALOX15P16050 662 aaPredicted RBP19.02■□□□□ 0.64
COPS7A-215ENST00000543155 HARS2P49590 506 aaKnown RBP19.02■□□□□ 0.64
COPS7A-215ENST00000543155 AFF1P51825 1210 aaKnown RBP19.02■□□□□ 0.64
COPS7A-215ENST00000543155 CSE1LP55060 971 aaKnown RBP19.02■□□□□ 0.64
COPS7A-215ENST00000543155 PRPSAP1Q14558 356 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 FSTL4Q6MZW2 842 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 RSPH3Q86UC2 560 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 SCUBE1Q8IWY4 988 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 IL22Q9GZX6 179 aa19.02■□□□□ 0.64
COPS7A-215ENST00000543155 SNX10Q9Y5X0 201 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms