RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SARDHQ9UL12 918 aa20.51■□□□□ 0.87
DDX11-220ENST00000542244 PKD1L2Q7Z442 2459 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 EDDM13A0A1B0GTR0 161 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 TYW5A2RUC4 315 aaKnown RBP20.5■□□□□ 0.87
DDX11-220ENST00000542244 F5H5T6 163 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 CBX4O00257 560 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 SRPRAP08240 638 aaKnown RBP20.5■□□□□ 0.87
DDX11-220ENST00000542244 DRD3P35462 400 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 PPP2CBP62714 309 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 PPP2CAP67775 309 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 EXOC3L4Q17RC7 722 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 OR6B2Q6IFH4 312 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 ENOSF1Q7L5Y1 443 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 CAAP1Q9H8G2 361 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.5■□□□□ 0.87
DDX11-220ENST00000542244 DNAJC12Q9UKB3 198 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 PCDHGC3Q9UN70 934 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 NCKAP1Q9Y2A7 1128 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 CEP83Q9Y592 693 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 PCDHGB2Q9Y5G2 931 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 FREM2Q5SZK8 3169 aa20.5■□□□□ 0.87
DDX11-220ENST00000542244 A0A1W2PPC4 97 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 TARSL2A2RTX5 802 aaKnown RBP20.49■□□□□ 0.87
DDX11-220ENST00000542244 RNF103O00237 685 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 DKK1O94907 266 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 CLDN6P56747 220 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 NME3Q13232 169 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 AUHQ13825 339 aaKnown RBP20.49■□□□□ 0.87
DDX11-220ENST00000542244 POM121L1PQ3SYA9 428 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 ARTNQ5T4W7 220 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 GATAD2AQ86YP4 633 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 ATP6V0D2Q8N8Y2 350 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 ZNF557Q8N988 423 aaPredicted RBP20.49■□□□□ 0.87
DDX11-220ENST00000542244 KDM1BQ8NB78 822 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 OMDQ99983 421 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 ADAMTS1Q9UHI8 967 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 VANGL2Q9ULK5 521 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 OR51B4Q9Y5P0 310 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 HS3ST4Q9Y661 456 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 NYNRINQ9P2P1 1898 aaKnown RBP20.49■□□□□ 0.87
DDX11-220ENST00000542244 ZFYVE26Q68DK2 2539 aa20.49■□□□□ 0.87
DDX11-220ENST00000542244 PTPRBP23467 1997 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 A0A1W2PR77 199 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 FLRT2O43155 660 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 CNTN5O94779 1100 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 FGFR1OPO95684 399 aaKnown RBP20.48■□□□□ 0.87
DDX11-220ENST00000542244 MTIF2P46199 727 aaKnown RBP20.48■□□□□ 0.87
DDX11-220ENST00000542244 ADPRHP54922 357 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 CDK17Q00537 523 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 KCNMA1Q12791 1236 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 TEAD4Q15561 434 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 MIIPQ5JXC2 388 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 MDM1Q8TC05 714 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 PIGVQ9NUD9 493 aa20.48■□□□□ 0.87
DDX11-220ENST00000542244 APOBEC2Q9Y235 224 aaKnown RBP20.48■□□□□ 0.87
DDX11-220ENST00000542244 FAM149AA5PLN7 773 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 VILLO15195 856 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 RNASEH1O60930 286 aaKnown RBP20.47■□□□□ 0.87
DDX11-220ENST00000542244 RTN2O75298 545 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 PAGE1O75459 146 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 MOCS3O95396 460 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 ADCY5O95622 1261 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 IL1BP01584 269 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 PLK1P53350 603 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 UBE2HP62256 183 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 DPCR1Q3MIW9 517 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 C2CD6Q53TS8 623 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 CCDC157Q569K6 752 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.47■□□□□ 0.87
DDX11-220ENST00000542244 C11orf57Q6ZUT1 292 aaPredicted RBP20.47■□□□□ 0.87
DDX11-220ENST00000542244 PROSER1Q86XN7 944 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 CCDC117Q8IWD4 279 aaPredicted RBP20.47■□□□□ 0.87
DDX11-220ENST00000542244 OR2T34Q8NGX1 318 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 OR14C36Q8NHC7 312 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 RNF34Q969K3 372 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 RPRD1AQ96P16 312 aaPredicted RBP20.47■□□□□ 0.87
DDX11-220ENST00000542244 ASNSD1Q9NWL6 643 aa20.47■□□□□ 0.87
DDX11-220ENST00000542244 CABIN1Q9Y6J0 2220 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 A0A1B0GVM2 712 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 TCAF2A6NFQ2 919 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 HSF2BPO75031 334 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 DAB1O75553 588 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 MT-CO1P00395 513 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 GOT1P17174 413 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 ABCB4P21439 1286 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 CCR1P32246 355 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 RDXP35241 583 aaKnown RBP20.46■□□□□ 0.87
DDX11-220ENST00000542244 RACK1P63244 317 aaKnown RBP20.46■□□□□ 0.87
DDX11-220ENST00000542244 SLC6A3Q01959 620 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 ALFQ53S48 1182 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 EFHC1Q5JVL4 640 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 RNF219Q5W0B1 726 aaPredicted RBP20.46■□□□□ 0.87
DDX11-220ENST00000542244 TRNP1Q6NT89 227 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 ADAT2Q7Z6V5 191 aaKnown RBP20.46■□□□□ 0.87
DDX11-220ENST00000542244 ZNF683Q8IZ20 524 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 PSMB7Q99436 277 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 FEM1AQ9BSK4 669 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 TRIM62Q9BVG3 475 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 SIK2Q9H0K1 926 aa20.46■□□□□ 0.87
DDX11-220ENST00000542244 FZD4Q9ULV1 537 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms