RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ALFQ53S48 1182 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
LTBR-208ENST00000541005 SARM1Q6SZW1 724 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 SETD3Q86TU7 594 aaPredicted RBP13.49□□□□□ -0.25
LTBR-208ENST00000541005 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 DRC7Q8IY82 874 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 APCDD1Q8J025 514 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 PGBD3Q8N328 593 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 DCLK2Q8N568 766 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 OR52K2Q8NGK3 314 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 OR2T3Q8NH03 318 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 FNIP1Q8TF40 1166 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 FEM1AQ9BSK4 669 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 RAB6CQ9H0N0 254 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 OSBPL2Q9H1P3 480 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 RETREG1Q9H6L5 497 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 PRDM16Q9HAZ2 1276 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 PARD6AQ9NPB6 346 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 USP36Q9P275 1121 aaKnown RBP13.49□□□□□ -0.25
LTBR-208ENST00000541005 MBD1Q9UIS9 605 aaPredicted RBP13.49□□□□□ -0.25
LTBR-208ENST00000541005 NEU3Q9UQ49 428 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 ERVW-1Q9UQF0 538 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 SNX10Q9Y5X0 201 aa13.49□□□□□ -0.25
LTBR-208ENST00000541005 DOCK9Q9BZ29 2069 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 IGHV1OR15-9A0A0B4J2B8 117 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 TMCO5BA8MYB1 307 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 CNTN5O94779 1100 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 MZF1P28698 734 aaPredicted RBP13.48□□□□□ -0.25
LTBR-208ENST00000541005 CASP14P31944 242 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 AIF1P55008 147 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 ECT2LQ008S8 904 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 OGDHQ02218 1023 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 HNRNPA1L2Q32P51 320 aaKnown RBP13.48□□□□□ -0.25
LTBR-208ENST00000541005 PLA2G2CQ5R387 149 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 DCUN1D2Q6PH85 259 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 SLC36A4Q6YBV0 504 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 ZNF783Q6ZMS7 281 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 VPS36Q86VN1 386 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 CCDC185Q8N715 623 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 RLN3Q8WXF3 142 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 ZYG11BQ9C0D3 744 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 SLC6A17Q9H1V8 727 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 PRSS16Q9NQE7 514 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 OR12D3Q9UGF7 316 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 SUN2Q9UH99 717 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 NENFQ9UMX5 172 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 INVSQ9Y283 1065 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 SCINQ9Y6U3 715 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 PCDH15Q96QU1 1955 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 ADAMTS9Q9P2N4 1935 aa13.48□□□□□ -0.25
LTBR-208ENST00000541005 ASCC3Q8N3C0 2202 aaKnown RBP13.48□□□□□ -0.25
LTBR-208ENST00000541005 ATMINO43313 823 aaPredicted RBP13.47□□□□□ -0.25
LTBR-208ENST00000541005 FOXD2O60548 495 aaPredicted RBP13.47□□□□□ -0.25
LTBR-208ENST00000541005 PLEKP08567 350 aaPredicted RBP13.47□□□□□ -0.25
LTBR-208ENST00000541005 CTSOP43234 321 aaPredicted RBP13.47□□□□□ -0.25
LTBR-208ENST00000541005 ST8SIA6P61647 398 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 ZBTB16Q05516 673 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 ZNF252P-AS1Q0IIN9 211 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 CSRP2Q16527 193 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 KIAA1324Q6UXG2 1013 aaKnown RBP13.47□□□□□ -0.25
LTBR-208ENST00000541005 TMC6Q7Z403 805 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 FRMD1Q8N878 549 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 CPLX3Q8WVH0 158 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 ZNF653Q96CK0 615 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 ITM2CQ9NQX7 267 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 MPP6Q9NZW5 540 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 ARHGAP20Q9P2F6 1191 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 CNOT8Q9UFF9 292 aaKnown RBP13.47□□□□□ -0.25
LTBR-208ENST00000541005 ADAMTS1Q9UHI8 967 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 CACNA1AO00555 2505 aa13.47□□□□□ -0.25
LTBR-208ENST00000541005 DMXL1Q9Y485 3027 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 A0A087X0T9 212 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 EDDM13A0A1B0GTR0 161 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 ILVBLA1L0T0 632 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 BCLAF3A2AJT9 711 aaKnown RBP13.46□□□□□ -0.25
LTBR-208ENST00000541005 TARSL2A2RTX5 802 aaKnown RBP13.46□□□□□ -0.25
LTBR-208ENST00000541005 TMEM191CA6NGB0 347 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 RHOCP08134 193 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 FAM228BP0C875 321 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 DESP17661 470 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 L1CAMP32004 1257 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 MPLP40238 635 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 TPMTP51580 245 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 LMNB2Q03252 620 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 SPEM2Q0P670 501 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 SEMA3BQ13214 749 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 RNF219Q5W0B1 726 aaPredicted RBP13.46□□□□□ -0.25
LTBR-208ENST00000541005 LPCAT2Q7L5N7 544 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 SLFN11Q7Z7L1 901 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 DNAAF5Q86Y56 855 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 ZNF366Q8N895 744 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 DCAF4L2Q8NA75 395 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 FRS2Q8WU20 508 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 PRCCQ92733 491 aaPredicted RBP13.46□□□□□ -0.25
LTBR-208ENST00000541005 ERLEC1Q96DZ1 483 aa13.46□□□□□ -0.25
LTBR-208ENST00000541005 SIPA1Q96FS4 1042 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms