RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 PRSS51A0A1B0GVH4 220 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 CCRL2O00421 344 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ZSCAN5DPP0CG00 497 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 HSPA1AP0DMV8 641 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 HSPA1BP0DMV9 641 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 MYCLP12524 364 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 KRT10P13645 584 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 TGM1P22735 817 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 BDNFP23560 247 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 APLP1P51693 650 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 HTRA3P83110 453 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 SLC18A2Q05940 514 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ORC2Q13416 577 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 DNASE1L3Q13609 305 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 RAB39AQ14964 217 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 PGM5Q15124 567 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 TAF1CQ15572 869 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 KNOP1Q1ED39 458 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 CEP55Q53EZ4 464 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 BOLA3Q53S33 107 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 FAM47CQ5HY64 1035 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 MOXD1Q6UVY6 613 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 MYO1HQ8N1T3 1032 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 GTF3C2Q8WUA4 911 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 TP53INP1Q96A56 240 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 FEM1CQ96JP0 617 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 EHMT1Q9H9B1 1298 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 SCUBE2Q9NQ36 999 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 STK39Q9UEW8 545 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 PCDHB13Q9Y5F0 798 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 NFASCO94856 1347 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ZNF839A8K0R7 811 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 SYCE1LA8MT33 242 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 GOLGA8MH3BSY2 632 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 M0QX08 132 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 NUAK1O60285 661 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 FAM189A1O60320 539 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 AOC2O75106 756 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 CLPXO76031 633 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 FKBP9O95302 570 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 PGK2P07205 417 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ITGB5P18084 799 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 RFC1P35251 1148 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 GRIA3P42263 894 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ZNF135P52742 658 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 PPP2R2BQ00005 443 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 FLOT2Q14254 428 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 KLHL38Q2WGJ6 581 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 CYP4A22Q5TCH4 519 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 CDHR3Q6ZTQ4 885 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 SH2D5Q6ZV89 423 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 SIX6OS1Q8N1H7 587 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 CACTIN-AS1Q8N1I8 211 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 BRSK1Q8TDC3 778 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ACMSDQ8TDX5 336 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 TMA16Q96EY4 203 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 NAP1L4Q99733 375 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 COQ7Q99807 217 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 SLC29A1Q99808 456 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ACSS3Q9H6R3 686 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 COQ10BQ9H8M1 238 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 NANOGQ9H9S0 305 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 FANCEQ9HB96 536 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 CREBZFQ9NS37 354 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ARMC1Q9NVT9 282 aa9.68□□□□□ -0.86
CTNNA1-243ENST00000540387 ASTN1O14525 1302 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 GOLGA8QA0A0J9YX86 632 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 GOLGA8OA6NCC3 632 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 GOLGA8NF8WBI6 632 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 H0YJX3 145 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 TAF4O00268 1085 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 MEIS1O00470 390 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 MSH4O15457 936 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 B4GALT4O60513 344 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 GCATO75600 419 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 SPAG6O75602 509 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 BCL10O95999 233 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 NR3C1P04150 777 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 NR3C2P08235 984 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 ARP10275 920 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 RALAP11233 206 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 GLRA2P23416 452 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 TTKP33981 857 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 OPRL1P41146 370 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 TM4SF4P48230 202 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 GNG2P59768 71 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 KLF1Q13351 362 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 IKBKEQ14164 716 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 SMU1Q2TAY7 513 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 LDLRAP1Q5SW96 308 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 UBE2UQ5VVX9 321 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 PPP4R4Q6NUP7 873 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 FAM117BQ6P1L5 589 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 AKAP14Q86UN6 197 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 GPBP1Q86WP2 473 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 SNX29P2Q8IUI4 249 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 FAM47BQ8NA70 645 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 ANGPTL6Q8NI99 470 aa9.67□□□□□ -0.86
CTNNA1-243ENST00000540387 NSUN6Q8TEA1 469 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms