RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TLR1Q15399 786 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TJAP1Q5JTD0 557 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TTC39BQ5VTQ0 682 aaPredicted RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 PPP1R2P3Q6NXS1 205 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZNF410Q86VK4 478 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZC3H3Q8IXZ2 948 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 PDZD8Q8NEN9 1154 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TAS1R2Q8TE23 839 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 KIFC3Q9BVG8 833 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 SSU72Q9NP77 194 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 KCND2Q9NZV8 630 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 XPO7Q9UIA9 1087 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 CDH22Q9UJ99 828 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 POMPQ9Y244 141 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 CARD8Q9Y2G2 431 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TMEM98Q9Y2Y6 226 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 A0A087WXM4 84 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 H3BNX3 289 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 RFXAPO00287 272 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 SOX1O00570 391 aaPredicted RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 ITM2AO43736 263 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 MAN1A2O60476 641 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 BANF1O75531 89 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 HSPA4LO95757 839 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 DLDP09622 509 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 CD19P15391 556 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ICAM3P32942 547 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 GSTM4Q03013 218 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 SPIRE1Q08AE8 756 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 NDUFA5Q16718 116 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZNF423Q2M1K9 1284 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZNF394Q53GI3 561 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TMEM214Q6NUQ4 689 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 FRA10AC1Q70Z53 315 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ANKS1BQ7Z6G8 1248 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZDHHC14Q8IZN3 488 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 CALML6Q8TD86 181 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TRPC4APQ8TEL6 797 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZNF558Q96NG5 402 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 RIT2Q99578 217 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 HNRNPABQ99729 332 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 AGO4Q9HCK5 861 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 VAV3Q9UKW4 847 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 DNPEPQ9ULA0 475 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 SQORQ9Y6N5 450 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZC3H11AO75152 810 aaKnown RBP eCLIP8.87□□□□□ -0.99
DDB1-217ENST00000540166 ETS1P14921 441 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 EDNRBP24530 442 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 CDK9P50750 372 aaKnown RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 FMO1Q01740 532 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 TRAF2Q12933 501 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 SYCP2LQ5T4T6 812 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 UGT2A3Q6UWM9 527 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 ZCCHC23Q6ZST2 131 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 MARVELD2Q8N4S9 558 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 KCTD17Q8N5Z5 321 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 ALLCQ8N6M5 410 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 HPS1Q92902 700 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 TMEM121Q9BTD3 319 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 MECRQ9BV79 373 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 STRIP2Q9ULQ0 834 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 FUOMA2VDF0 154 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 ZNF839A8K0R7 811 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 ZMPSTE24O75844 475 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 ZBED1O96006 694 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 VARSP26640 1264 aaKnown RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 SLC5A2P31639 672 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 STIP1P31948 543 aaKnown RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 ARL1P40616 181 aaPredicted RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 SNX17Q15036 470 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 PDPK2PQ6A1A2 396 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 BNC2Q6ZN30 1099 aaPredicted RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 RCOR2Q8IZ40 523 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 RNF148Q8N7C7 305 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 FBXO27Q8NI29 283 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 AGR3Q8TD06 166 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 UHRF1Q96T88 793 aaPredicted RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 HEPHQ9BQS7 1158 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 MRPL9Q9BYD2 267 aaKnown RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 SUN2Q9UH99 717 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 H7C0C1 242 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 DGKIO75912 1065 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 OXSR1O95747 527 aaPredicted RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 BCL10O95999 233 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 CDH2P19022 906 aaPredicted RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 YWHABP31946 246 aaKnown RBP8.87□□□□□ -0.99
DDB1-217ENST00000540166 PPM1AP35813 382 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 ATP5OP48047 213 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 FBXW8Q8N3Y1 598 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 ADCY4Q8NFM4 1077 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 CAPSLQ8WWF8 208 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 PLEKHA8Q96JA3 519 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 ACSS3Q9H6R3 686 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 THAP1Q9NVV9 213 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 DPP7Q9UHL4 492 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 PADI3Q9ULW8 664 aa8.87□□□□□ -0.99
DDB1-217ENST00000540166 TMEM150BA6NC51 233 aa8.86□□□□□ -0.99
DDB1-217ENST00000540166 DCXO43602 365 aa8.86□□□□□ -0.99
DDB1-217ENST00000540166 SIN3BO75182 1162 aa8.86□□□□□ -0.99
DDB1-217ENST00000540166 EIF2S1P05198 315 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms