RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TXNDC9O14530 226 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 TSPAN1O60635 241 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 DNAJA2O60884 412 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 ZNF189O75820 626 aaPredicted RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 PGK2P07205 417 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 SMIM18P0DKX4 95 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 TXNP10599 105 aaKnown RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 LCP1P13796 627 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 PIK3R1P27986 724 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 ADSLP30566 484 aaPredicted RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 MATKP42679 507 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 PAFAH1B3Q15102 231 aaKnown RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 TLR1Q15399 786 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 ZFP1Q6P2D0 407 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 ARHGAP22Q7Z5H3 698 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 ARPINQ7Z6K5 226 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 STRA8Q7Z7C7 330 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 TMEM135Q86UB9 458 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 CRYBG2Q8N1P7 616 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 CPSF7Q8N684 471 aaKnown RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDH13-204ENST00000539548 OR6B3Q8NGW1 331 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 RP9Q8TA86 221 aaKnown RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 DCUN1D1Q96GG9 259 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 GCNAQ96QF7 691 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 EPAS1Q99814 870 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 GATA5Q9BWX5 397 aaPredicted RBP9.88□□□□□ -0.83
CDH13-204ENST00000539548 R3HDMLQ9H3Y0 253 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 OXSMQ9NWU1 459 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 AKT3Q9Y243 479 aa9.88□□□□□ -0.83
CDH13-204ENST00000539548 MCM3APO60318 1980 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 E2F8A0AVK6 867 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 PPEF2O14830 753 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 AIM2O14862 343 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 USP2O75604 605 aaPredicted RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 SLC25A27O95847 323 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 APOA4P06727 396 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 RPL5P46777 297 aaKnown RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 ZBTB6Q15916 424 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 ZNF423Q2M1K9 1284 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 SLC25A52Q3SY17 297 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 DALRD3Q5D0E6 543 aaKnown RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 PID1Q7Z2X4 250 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 SETD3Q86TU7 594 aaPredicted RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 SATL1Q86VE3 508 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 SPATA24Q86W54 205 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 FAM131BQ86XD5 332 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 DSELQ8IZU8 1212 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 LRRC52Q8N7C0 313 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 C7orf31Q8N865 590 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CCNYQ8ND76 341 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CATSPER1Q8NEC5 780 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 OR52K1Q8NGK4 314 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 URGCPQ8TCY9 931 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 RNF139Q8WU17 664 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 OPTNQ96CV9 577 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 HSFY1Q96LI6 401 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 PRICKLE1Q96MT3 831 aaPredicted RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 PPP1R16BQ96T49 567 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CEP41Q9BYV8 373 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 ZCWPW1Q9H0M4 648 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 PRDM12Q9H4Q4 367 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 NMRAL1Q9HBL8 299 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 PLK2Q9NYY3 685 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 SEPT10Q9P0V9 454 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 MID2Q9UJV3 735 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 RAP2CQ9Y3L5 183 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 PPP2R3BQ9Y5P8 575 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 RALGAPA2Q2PPJ7 1873 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 DNAJC25-GNG10A0A024R161 153 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 ZCWPW2A0A1B0GU75 182 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 MAGEB16A2A368 324 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 HDAC3O15379 428 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 TIMM44O43615 452 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CAPN15O75808 1086 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CNMDO75829 334 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 VTNP04004 478 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CAPNS1P04632 268 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 C2P06681 752 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 ETS2P15036 469 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 ADORA2BP29275 332 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 SERPINB5P36952 375 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 HADHAP40939 763 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 SULT1E1P49888 294 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 RPL14P50914 215 aaKnown RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 PRKAA2P54646 552 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CSE1LP55060 971 aaKnown RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 MAP7Q14244 749 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 ADGRE1Q14246 886 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 HERC3Q15034 1050 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 PIGGQ5H8A4 983 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 BNC2Q6ZN30 1099 aaPredicted RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 SNX32Q86XE0 403 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 TICAM1Q8IUC6 712 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 FBXO16Q8IX29 292 aaPredicted RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 DEFB106AQ8N104 65 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 ADCY4Q8NFM4 1077 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 RDH11Q8TC12 318 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 EZH1Q92800 747 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms