RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 FAM72AQ5TYM5 149 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 BTBD8Q5XKL5 378 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 FAM72DQ6L9T8 149 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 C1orf228Q6PIY5 440 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 RFX8Q6ZV50 586 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 TRMT10CQ7L0Y3 403 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 PRUNE1Q86TP1 453 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 FAM72BQ86X60 149 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 CDKL3Q8IVW4 592 aaPredicted RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 KREMEN2Q8NCW0 462 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 FBXO32Q969P5 355 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 TIFAQ96CG3 184 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 TLCD1Q96CP7 247 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 PGM2Q96G03 612 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 SLC39A13Q96H72 371 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 HAPLN3Q96S86 360 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 SPATS2LQ9NUQ6 558 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 CLIC5Q9NZA1 410 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 C15orf41Q9Y2V0 281 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 SYNJ2BP-COX16A0A087WUM0 186 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 EPOPA6NHQ4 379 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 KCNU1A8MYU2 1149 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 EEF2KO00418 725 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 ZNF189O75820 626 aaPredicted RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 C1RP00736 705 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 CSH1P0DML2 217 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 CSH2P0DML3 217 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 ALADP13716 330 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 HMGA1P17096 107 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 CCND1P24385 295 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 TWF1Q12792 350 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 TAF10Q12962 218 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 VEPH1Q14D04 833 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 PRKD1Q15139 912 aaPredicted RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 KRT71Q3SY84 523 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 CCDC38Q502W7 563 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 DARS2Q6PI48 645 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 C4orf22Q6V702 233 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 CEP128Q6ZU80 1094 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 CCDC149Q6ZUS6 474 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 BZW1Q7L1Q6 419 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 PCGF5Q86SE9 256 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 NAT8LQ8N9F0 302 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 FAM71DQ8N9W8 422 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 GDPD5Q8WTR4 605 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 UBLCP1Q8WVY7 318 aaPredicted RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 RSAD2Q8WXG1 361 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 CPT1BQ92523 772 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 PRCCQ92733 491 aaPredicted RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 CASP10Q92851 521 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 MYRFLQ96LU7 910 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 SERPINB11Q96P15 392 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 SH3GL3Q99963 347 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 TMEM109Q9BVC6 243 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 LMAN2LQ9H0V9 348 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 WDCPQ9H6R7 721 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 C10orf88Q9H8K7 445 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 COX16Q9P0S2 106 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 GMIPQ9P107 970 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 MAGED2Q9UNF1 606 aaPredicted RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 NOVA2Q9UNW9 492 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 ATP8A1Q9Y2Q0 1164 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 MFHAS1Q9Y4C4 1052 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 NOTCH4Q99466 2003 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 H7C0C1 242 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 RIPK2O43353 540 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 CLASP2O75122 1294 aaKnown RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 GCATO75600 419 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 IFNB1P01574 187 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 IGLV3-27P01718 113 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 C8AP07357 584 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 PAX7P23759 505 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 ATP5OP48047 213 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 EPHB3P54753 998 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 MAGOHP61326 146 aaKnown RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 SARNPP82979 210 aaKnown RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 PLD1Q13393 1074 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 KCNJ11Q14654 390 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 TAF12Q16514 161 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 SNX30Q5VWJ9 437 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 DNAJB7Q7Z6W7 309 aaPredicted RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 PIGWQ7Z7B1 504 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 ZC3H18Q86VM9 953 aaKnown RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 PPIL6Q8IXY8 311 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 OVCA2Q8WZ82 227 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 PSMG2Q969U7 264 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 TRMT2BQ96GJ1 504 aaKnown RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 FCRL2Q96LA5 508 aaPredicted RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 EPAS1Q99814 870 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 TKTL2Q9H0I9 626 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 TLR8Q9NR97 1041 aaKnown RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 OLA1Q9NTK5 396 aaKnown RBP9.08□□□□□ -0.96
DDB1-213ENST00000539332 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.08□□□□□ -0.96
DDB1-213ENST00000539332 PAK5Q9P286 719 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 TLR6Q9Y2C9 796 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 HEY1Q9Y5J3 304 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 MIA3Q5JRA6 1907 aa9.08□□□□□ -0.96
DDB1-213ENST00000539332 EYSQ5T1H1 3165 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 E7ESA3 106 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms