RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PIAS3Q9Y6X2 628 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 WDR81Q562E7 1941 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FNDC1Q4ZHG4 1894 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TDRD15B5MCY1 1934 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 EDDM13A0A1B0GTR0 161 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TBC1D3BA6NDS4 549 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 EPOPA6NHQ4 379 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 KCNU1A8MYU2 1149 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 C2CD4DB7Z1M9 353 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 E5RJQ4 531 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PI4K2BG5E9Z4 385 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RBAK-RBAKDNI3L0D1 243 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CACNG3O60359 315 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DFNA5O60443 496 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 MTRF1O75570 445 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RFPL2O75678 378 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PROSCO94903 275 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ADH1BP00325 375 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PRNPP04156 253 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RPSAP08865 295 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ACADMP11310 421 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TACR2P21452 398 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CORO1AP31146 461 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PPARGP37231 505 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PAFAH1B1P43034 410 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RGS7P49802 495 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 AFF1P51825 1210 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 PLK1P53350 603 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 CSE1LP55060 971 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FMO1Q01740 532 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 MYBPC3Q14896 1274 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SYCP2LQ5T4T6 812 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ERMARDQ5T6L9 678 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ZDHHC20Q5W0Z9 365 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DAAM2Q86T65 1068 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 NOP9Q86U38 636 aaKnown RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 MFN1Q8IWA4 741 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 SLC44A3Q8N4M1 653 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ARL14EPQ8N8R7 260 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FLCNQ8NFG4 579 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 GRK7Q8WTQ7 553 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FRS2Q8WU20 508 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RXFP2Q8WXD0 754 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 OR8D1Q8WZ84 308 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 BAP1Q92560 729 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 FATE1Q969F0 183 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 RAB7BQ96AH8 199 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 NPY6RQ99463 290 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 TTC1Q99614 292 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 LPIN3Q9BQK8 851 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF670Q9BS34 389 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 LRRC3Q9BY71 257 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 DPEP3Q9H4B8 488 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 NHEJ1Q9H9Q4 299 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF334Q9HCZ1 680 aaPredicted RBP3.68□□□□□ -1.82
PTPN22-211ENST00000538253 GMEB2Q9UKD1 530 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ACAD8Q9UKU7 415 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 ERVW-1Q9UQF0 538 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 NUMBLQ9Y6R0 609 aa3.68□□□□□ -1.82
PTPN22-211ENST00000538253 LRRC72A6NJI9 287 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 GOLGA8CPA6NN73 597 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 WASH4PA8MWX3 477 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SPECC1L-ADORA2AF8WAN1 911 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PDE2AO00408 941 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 EEF2KO00418 725 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ADAM12O43184 909 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 COCHO43405 550 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 B4GALT3O60512 393 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 RAMP2O60895 175 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 RNASEH2AO75792 299 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TJP3O95049 919 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 IGSF6O95976 241 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SPATA31D3P0C874 917 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 UNGP13051 313 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TGM2P21980 687 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 LTBRP36941 435 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 HALP42357 657 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CXCL12P48061 93 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SNRPD1P62314 119 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 CKAP4Q07065 602 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SLMAPQ14BN4 828 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 DHCR24Q15392 516 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TEAD4Q15561 434 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PLEKHG6Q3KR16 790 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 WDR45BQ5MNZ6 344 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SCYL2Q6P3W7 929 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 SPATA31D4Q6ZUB0 917 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TPRG1Q6ZUI0 275 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 FAM183BPQ6ZVS7 135 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF354CQ86Y25 554 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 XYLT1Q86Y38 959 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 FAM217AQ8IXS0 508 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 PCDH20Q8N6Y1 951 aaKnown RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 C12orf76Q8N812 135 aaPredicted RBP3.67□□□□□ -1.82
PTPN22-211ENST00000538253 DCAF4L2Q8NA75 395 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 AVL9Q8NBF6 648 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 TSTD1Q8NFU3 115 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 FIBINQ8TAL6 211 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 KIAA1524Q8TCG1 905 aa3.67□□□□□ -1.82
PTPN22-211ENST00000538253 RABGGTAQ92696 567 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms