RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 RAD51CO43502 376 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 CYP17A1P05093 508 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 VAV1P15498 845 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 PTGIRP43119 386 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 ATP5OP48047 213 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 GDF10P55107 478 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 CDH4P55283 916 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 GALNT2Q10471 571 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 EML3Q32P44 896 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 UMODL1-AS1Q8N2C9 162 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 TTC13Q8NBP0 860 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 OR7D4Q8NG98 312 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 IRF7Q92985 503 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 NKD2Q969F2 451 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 CCDC114Q96M63 670 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 SPHK2Q9NRA0 654 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 TBC1D14Q9P2M4 693 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 NUMBLQ9Y6R0 609 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 DOCK4Q8N1I0 1966 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 TTI1O43156 1089 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 RRP9O43818 475 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 CLDN11O75508 207 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 LUC7L3O95232 432 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 ZSCAN5DPP0CG00 497 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 ETS1P14921 441 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 RBL1P28749 1068 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 CHRNA3P32297 505 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 IFNAR2P48551 515 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 NR2C2P49116 596 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 PAPOLAP51003 745 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 SLC7A5Q01650 507 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 ANO4Q32M45 955 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 MPPE1Q53F39 396 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 DARS2Q6PI48 645 aaKnown RBP16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 CHST9Q7L1S5 443 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 MMGT1Q8N4V1 131 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 QKIQ96PU8 341 aaKnown RBP eCLIP16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 TRIM51Q9BSJ1 452 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 HPS4Q9NQG7 708 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 OBP2AQ9NY56 170 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 EPS15L1Q9UBC2 864 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 ZNF148Q9UQR1 794 aa16.05■□□□□ 0.16
SFSWAP-206ENST00000537582 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RASA4BC9J798 803 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 TRIM24O15164 1050 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RASA4O43374 803 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RAMP2O60895 175 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 PENKP01210 267 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RHOXF2BP0C7M4 288 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 MZF1P28698 734 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 SERPINB6P35237 376 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 GARSP41250 739 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 MAPKAPK2P49137 400 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 ZNF177Q13360 481 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 HTR4Q13639 388 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 PRKD1Q15139 912 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 DHCR24Q15392 516 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 TRIP13Q15645 432 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 SLC45A4Q5BKX6 768 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 TTC39BQ5VTQ0 682 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 ASTLQ6HA08 431 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 LEKR1Q6ZMV7 388 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 OTOP3Q7RTS5 596 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 MFSD6LQ8IWD5 586 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 CCDC105Q8IYK2 499 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 NAT16Q8N8M0 369 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 FAM71DQ8N9W8 422 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 CCNYQ8ND76 341 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 ELSPBP1Q96BH3 223 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 FAM83CQ9BQN1 747 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RHOXF2Q9BQY4 288 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 CEP41Q9BYV8 373 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 PRDM16Q9HAZ2 1276 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 USP29Q9HBJ7 922 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 TBC1D30Q9Y2I9 924 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 NYNRINQ9P2P1 1898 aaKnown RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 COL4A3Q01955 1670 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 ZSCAN5CA6NGD5 496 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 ANHXE9PGG2 379 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 H0Y626 953 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 SLC9A3R1O14745 358 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RHOCP08134 193 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 TYRP14679 529 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 GLDCP23378 1020 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 CSKP41240 450 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 FNTAP49354 379 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 NDST2P52849 883 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 DR1Q01658 176 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 GNA12Q03113 381 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 FCHO2Q0JRZ9 810 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 AP1B1Q10567 949 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 CDH18Q13634 790 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RNF219Q5W0B1 726 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 NAIF1Q69YI7 327 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 DRICH1Q6PGQ1 229 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-206ENST00000537582 C12orf40Q86WS4 652 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms