RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 FASP25445 335 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ACOT2P49753 483 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 RGS7P49802 495 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 IMPG1Q17R60 797 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ELMSAN1Q6PJG2 1045 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 POC5Q8NA72 575 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SYT11Q9BT88 431 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CEP44Q9C0F1 390 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CACYBPQ9HB71 228 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TUFT1Q9NNX1 390 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ABT1Q9ULW3 272 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PRELID1Q9Y255 219 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ASTN2O75129 1339 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 FAM20BO75063 409 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 HLA-DRAP01903 254 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CACNB3P54284 484 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 DLG1Q12959 904 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MTMR1Q13613 665 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 NFYCQ13952 458 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PDK1Q15118 436 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 AASDHQ4L235 1098 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 DCAF12L1Q5VU92 463 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MTERF3Q96E29 417 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 RPF1Q9H9Y2 349 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 RSAD1Q9HA92 442 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SARS2Q9NP81 518 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MOSPD1Q9UJG1 213 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 POMPQ9Y244 141 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ERGIC3Q9Y282 383 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PDZK1P1A8MUH7 402 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 FADS2P1A8MWK0 482 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 GPD2P43304 727 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 DGCR6Q14129 220 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SLC1A5Q15758 541 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 GPAT2Q6NUI2 795 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TAGAPQ8N103 731 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CENPSQ8N2Z9 138 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 HTRA1Q92743 480 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 NSUN4Q96CB9 384 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF668Q96K58 619 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SLC4A5Q9BY07 1137 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PNPLA8Q9NP80 782 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CEPT1Q9Y6K0 416 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PLIN4Q96Q06 1357 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 DOCK2Q92608 1830 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ANKRD36CQ5JPF3 1778 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MRASO14807 208 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 FKBP9O95302 570 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 IVDP26440 423 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SOX6P35712 828 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 JAK3P52333 1124 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TRAP1Q12931 704 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MMRN1Q13201 1228 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 AGKQ53H12 422 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 HDDC2Q7Z4H3 204 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TCAIMQ8N3R3 496 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SEMA4DQ92854 862 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 KCTD14Q9BQ13 255 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MTG1Q9BT17 334 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 OSBPL10Q9BXB5 764 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 LRRC4Q9HBW1 653 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 NSMCE4AQ9NXX6 385 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 AGO2Q9UKV8 859 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 UBDO15205 165 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 RPA1P27694 616 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CCND2P30279 289 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CYP51A1Q16850 503 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 EML3Q32P44 896 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ANGEL2Q5VTE6 544 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 XKRXQ6PP77 449 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MYO1HQ8N1T3 1032 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 DHRSXQ8N5I4 330 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PPHLN1Q8NEY8 458 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CITED4Q96RK1 184 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MECRQ9BV79 373 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 ROGDIQ9GZN7 287 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 RERGLQ9H628 205 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TMEM8AQ9HCN3 771 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CACNA2D2Q9NY47 1150 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 RUVBL2Q9Y230 463 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PTGES3LE9PB15 166 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 BOLA2-SMG1P6H3BVE0 249 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PSMD11O00231 422 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TNFRSF21O75509 655 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SEMA3DO95025 777 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CALCAP01258 141 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 HSMCR30P0CW71 290 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TRAF3Q13114 568 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 TAF12Q16514 161 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 KIZQ2M2Z5 673 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 AGMOQ6ZNB7 445 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 GPR180Q86V85 440 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 MIER2Q8N344 545 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 CYP4F12Q9HCS2 524 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 PIH1D1Q9NWS0 290 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 SIRPGQ9P1W8 387 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 GNEQ9Y223 722 aaKnown RBP5.5□□□□□ -1.53
PTPRD-213ENST00000537002 DGKBQ9Y6T7 804 aa5.5□□□□□ -1.53
PTPRD-213ENST00000537002 NUP188Q5SRE5 1749 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms