RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 FAM83DQ9H4H8 585 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 PNPLA8Q9NP80 782 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-207ENST00000536634 AMFRQ9UKV5 643 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 CAPN11Q9UMQ6 739 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 FRMPD3Q5JV73 1810 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 DOCK2Q92608 1830 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 ARHGEF17Q96PE2 2063 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-207ENST00000536634 DMDP11532 3685 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 A0A087WZ62 844 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 PMM2O15305 246 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 INMTO95050 263 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 LATS1O95835 1130 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 FGAP02671 866 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 TSHRP16473 764 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 CAPN2P17655 700 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 PRIM2P49643 509 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 RENBPP51606 427 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 ALDH5A1P51649 535 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-207ENST00000536634 CASP5P51878 434 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 TCP10Q12799 353 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 CHAF1AQ13111 956 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-207ENST00000536634 IFIT5Q13325 482 aaKnown RBP6.24□□□□□ -1.41
CLIP1-207ENST00000536634 SAFBQ15424 915 aaKnown RBP eCLIP6.24□□□□□ -1.41
CLIP1-207ENST00000536634 LRRC26Q2I0M4 334 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 MANEALQ5VSG8 457 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 FKBP1CQ5VVH2 108 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 MTHFD1LQ6UB35 978 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 RNF44Q7L0R7 432 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 ANKRD13CQ8N6S4 541 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 RNF152Q8N8N0 203 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 C11orf44Q8N8P7 122 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 SMCR8Q8TEV9 937 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-207ENST00000536634 IPCEF1Q8WWN9 437 aaPredicted RBP6.24□□□□□ -1.41
CLIP1-207ENST00000536634 TEKT1Q969V4 418 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 RITA1Q96K30 269 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 SNX18Q96RF0 628 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 NAA15Q9BXJ9 866 aaKnown RBP6.24□□□□□ -1.41
CLIP1-207ENST00000536634 ASIC5Q9NY37 505 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 VPS51Q9UID3 782 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 HPSEQ9Y251 543 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 DOCK1Q14185 1865 aa6.24□□□□□ -1.41
CLIP1-207ENST00000536634 MYO15AQ9UKN7 3530 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 MYO9BQ13459 2157 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 POM121BA6NF01 834 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 FOXN3O00409 490 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-207ENST00000536634 CXCL11O14625 94 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 DIO1P49895 249 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 SUMO2P61956 95 aaKnown RBP6.23□□□□□ -1.41
CLIP1-207ENST00000536634 SLC10A2Q12908 348 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-207ENST00000536634 LDHAL6AQ6ZMR3 332 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 PTCHD4Q6ZW05 846 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 USP49Q70CQ1 688 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 BCDIN3DQ7Z5W3 292 aaKnown RBP6.23□□□□□ -1.41
CLIP1-207ENST00000536634 RAB11FIP4Q86YS3 637 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 SDR16C5Q8N3Y7 309 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 PNLDC1Q8NA58 520 aaKnown RBP6.23□□□□□ -1.41
CLIP1-207ENST00000536634 USP38Q8NB14 1042 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 TRIB2Q92519 343 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 IQCDQ96DY2 449 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 TBCBQ99426 244 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 PUS3Q9BZE2 481 aaKnown RBP6.23□□□□□ -1.41
CLIP1-207ENST00000536634 TTYH1Q9H313 450 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-207ENST00000536634 GJB4Q9NTQ9 266 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 TMOD2Q9NZR1 351 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 GJD2Q9UKL4 321 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 AFG3L2Q9Y4W6 797 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 LOC285556D6RIA3 1793 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 MYH13Q9UKX3 1938 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 MUC6Q6W4X9 2439 aa6.23□□□□□ -1.41
CLIP1-207ENST00000536634 PRRT4C9JH25 899 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 H7C1Q1 480 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 CELA2AP08217 269 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 MYL3P08590 195 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 MYCLP12524 364 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-207ENST00000536634 TUBA4AP68366 448 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 LMAN2Q12907 356 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 UBE4AQ14139 1066 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 MAP3K21Q5TCX8 1036 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 FASTKD5Q7L8L6 764 aaKnown RBP6.22□□□□□ -1.41
CLIP1-207ENST00000536634 CCAR1Q8IX12 1150 aaKnown RBP6.22□□□□□ -1.41
CLIP1-207ENST00000536634 CCDC33Q8N5R6 958 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 ATP11CQ8NB49 1132 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 PJA1Q8NG27 643 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 FAM151AQ8WW52 585 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 DNAAF4Q8WXU2 420 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 SELENOOQ9BVL4 669 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 MYH16Q9H6N6 1097 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 FLRT1Q9NZU1 646 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 DNAJB11Q9UBS4 358 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 SLC45A1Q9Y2W3 748 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 ZHX2Q9Y6X8 837 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 CFAP54Q96N23 3096 aa6.22□□□□□ -1.41
CLIP1-207ENST00000536634 TRIOO75962 3097 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 TCRBV5S1A1TA0A578 114 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 M0R3H8 397 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 THAP12O43422 761 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 FOSL2P15408 326 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 CREB1P16220 341 aa6.21□□□□□ -1.42
CLIP1-207ENST00000536634 MPGP29372 298 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms