RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 HADHQ16836 314 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 LGSNQ5TDP6 509 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 DNAJC24Q6P3W2 148 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 OTOP3Q7RTS5 596 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 MTDHQ86UE4 582 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 PALM2Q8IXS6 379 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 PDIK1LQ8N165 341 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 TMEM35BQ8NCS4 154 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 LSM14AQ8ND56 463 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 ZNF707Q96C28 371 aaPredicted RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 ACSF2Q96CM8 615 aaPredicted RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 CYTH2Q99418 400 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 ARPC5LQ9BPX5 153 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 FAM213AQ9BRX8 229 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 SLCO1B3Q9NPD5 702 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 STX18Q9P2W9 335 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 RABGEF1Q9UJ41 708 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 STRIP2Q9ULQ0 834 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 hCG_1818297A0A087WSY0 165 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 E7ESA3 106 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 MAGEC1O60732 1142 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 CIB2O75838 187 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 CBX6O95503 412 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 C4BPAP04003 597 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 THP07101 528 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 PDHA1P08559 390 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 ACO1P21399 889 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 MMP8P22894 467 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 POLR2BP30876 1174 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 GJC1P36383 396 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 AP1B1Q10567 949 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 CLPPQ16740 277 aaPredicted RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 RTP2Q5QGT7 225 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 MFSD4BQ5TF39 518 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 DCUN1D2Q6PH85 259 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 LILRA6Q6PI73 481 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 BANPQ8N9N5 519 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 ZSWIM2Q8NEG5 633 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 CCDC110Q8TBZ0 833 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 SMG7Q92540 1137 aaKnown RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 FAM136AQ96C01 138 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 CORO1BQ9BR76 489 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 ADPGKQ9BRR6 497 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 TOPORSQ9NS56 1045 aaPredicted RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 FNIP2Q9P278 1114 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 STYXL1Q9Y6J8 313 aa11.93□□□□□ -0.5
CHRNB1-202ENST00000536404 CCDC162PA2VCL2 907 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 FOXO6A8MYZ6 492 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 I3L4J1 428 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 GSC2O15499 205 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 FAM155BO75949 473 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 PSMG1O95456 288 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 ACADVLP49748 655 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 EFNA5P52803 228 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 CACNA2D1P54289 1103 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 PTPN5P54829 565 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 YWHAEP62258 255 aaKnown RBP11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 CBLBQ13191 982 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 SPIDRQ14159 915 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 DCAF4L1Q3SXM0 396 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 DNAL1Q4LDG9 190 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 ATF7IP2Q5U623 682 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 RNF220Q5VTB9 566 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 FAM171A1Q5VUB5 890 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 SNX30Q5VWJ9 437 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 KAZNQ674X7 775 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 ATG16L1Q676U5 607 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 MFSD7Q6UXD7 560 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 GPR65Q8IYL9 337 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 SLC35B2Q8TB61 432 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 RAB3IL1Q8TBN0 382 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 RSAD2Q8WXG1 361 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 PTCD3Q96EY7 689 aaKnown RBP11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 APOPT1Q96IL0 206 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 MYADMQ96S97 322 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 PAFAH2Q99487 392 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 CGRRF1Q99675 332 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 MAK16Q9BXY0 300 aaKnown RBP11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 WDR6Q9NNW5 1121 aaKnown RBP11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 HEY2Q9UBP5 337 aa11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 MTCL1Q9Y4B5 1905 aaKnown RBP11.92□□□□□ -0.5
CHRNB1-202ENST00000536404 SF3B1O75533 1304 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 TRIP11Q15643 1979 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 DOCK6Q96HP0 2047 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 K7ERI5 159 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 ADAM12O43184 909 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 PIGRP01833 764 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 CD97P48960 835 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 RAP1GDS1P52306 607 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 RAB15P59190 212 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 SLC44A4Q53GD3 710 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 GLRA4Q5JXX5 417 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 SLC39A4Q6P5W5 647 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 TMEM270Q6UE05 265 aa11.91□□□□□ -0.5
CHRNB1-202ENST00000536404 LRRC74BQ6ZQY2 392 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms