RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ZNHIT2Q9UHR6 403 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 VPS51Q9UID3 782 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 PCDHGC3Q9UN70 934 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 J3QRK9 145 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CILPO75339 1184 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CYP2C9P11712 490 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CPOXP36551 454 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 BST1Q10588 318 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 RARS2Q5T160 578 aaKnown RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 JADE3Q92613 823 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 C18orf25Q96B23 403 aaPredicted RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 FBXL8Q96CD0 374 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 PLEKHA8Q96JA3 519 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 OSBPL10Q9BXB5 764 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 GBA3Q9H227 469 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 FAM49BQ9NUQ9 324 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 FLRT1Q9NZU1 646 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 EBF1Q9UH73 591 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CDH22Q9UJ99 828 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 NOX1Q9Y5S8 564 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 IKBKGQ9Y6K9 419 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 TCRBV5S1A1TA0A578 114 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 KDM1AO60341 852 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 TKTP29401 623 aaKnown RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 RBP5P82980 135 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CDO1Q16878 200 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 OGFRL1Q5TC84 451 aaPredicted RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 IQSEC1Q6DN90 963 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 BORAQ6PGQ7 559 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 RELL1Q8IUW5 271 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 RCOR2Q8IZ40 523 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 ALDH16A1Q8IZ83 802 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 TMCO5AQ8N6Q1 288 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 NSMCE3Q96MG7 304 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CCDC106Q9BWC9 280 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CNOT3O75175 753 aaKnown RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 MYL3P08590 195 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 P4HA1P13674 534 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 COPAP53621 1224 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 POU5F1BQ06416 359 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 APOFQ13790 326 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 PIGHQ14442 188 aaPredicted RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 TAF5Q15542 800 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CCNG2Q16589 344 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 FAM102AQ5T9C2 384 aaPredicted RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 DEPDC1Q5TB30 811 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 OR6B2Q6IFH4 312 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 SPOCD1Q6ZMY3 1216 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 ACOT1Q86TX2 421 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 CXorf38Q8TB03 319 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 HSPH1Q92598 858 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 EMID1Q96A84 441 aaPredicted RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 COPS7BQ9H9Q2 264 aaPredicted RBP14.3□□□□□ -0.12
LIG1-203ENST00000536218 TRPV5Q9NQA5 729 aa14.3□□□□□ -0.12
LIG1-203ENST00000536218 MGAMO43451 1857 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 HCRTO43612 131 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 IL1R2P27930 398 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 HOXA11P31270 313 aaPredicted RBP14.29□□□□□ -0.12
LIG1-203ENST00000536218 MSX2P35548 267 aaPredicted RBP14.29□□□□□ -0.12
LIG1-203ENST00000536218 CDKL1Q00532 357 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 CHI3L2Q15782 390 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 SH3PXD2AQ5TCZ1 1133 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 C7orf31Q8N865 590 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 ACTRT2Q8TDY3 377 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 GCOM2Q9BZD3 368 aaPredicted RBP14.29□□□□□ -0.12
LIG1-203ENST00000536218 NXF3Q9H4D5 531 aaKnown RBP14.29□□□□□ -0.12
LIG1-203ENST00000536218 H3BNX3 289 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 HMOX2P30519 316 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 CDH15P55291 814 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 GPX6P59796 221 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 GAD2Q05329 585 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 TAF1CQ15572 869 aaPredicted RBP14.29□□□□□ -0.12
LIG1-203ENST00000536218 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 TLK2Q86UE8 772 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 ALLCQ8N6M5 410 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 ARFGAP1Q8N6T3 406 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 BORCS5Q969J3 196 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 BIRC8Q96P09 236 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 RAB6CQ9H0N0 254 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 STRIP2Q9ULQ0 834 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 RAB26Q9ULW5 256 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 SLC45A1Q9Y2W3 748 aa14.29□□□□□ -0.12
LIG1-203ENST00000536218 DNALI1O14645 258 aaPredicted RBP14.28□□□□□ -0.12
LIG1-203ENST00000536218 CCNT2O60583 730 aaKnown RBP14.28□□□□□ -0.12
LIG1-203ENST00000536218 ZNF157P51786 506 aaPredicted RBP14.28□□□□□ -0.12
LIG1-203ENST00000536218 RPL26P61254 145 aaKnown RBP14.28□□□□□ -0.12
LIG1-203ENST00000536218 MRPS22P82650 360 aaKnown RBP14.28□□□□□ -0.12
LIG1-203ENST00000536218 CYP2A13Q16696 494 aa14.28□□□□□ -0.12
LIG1-203ENST00000536218 CST9Q5W186 159 aa14.28□□□□□ -0.12
LIG1-203ENST00000536218 XYLT1Q86Y38 959 aa14.28□□□□□ -0.12
LIG1-203ENST00000536218 CRLF3Q8IUI8 442 aa14.28□□□□□ -0.12
LIG1-203ENST00000536218 PALM2Q8IXS6 379 aa14.28□□□□□ -0.12
LIG1-203ENST00000536218 LZTR1Q8N653 840 aa14.28□□□□□ -0.12
LIG1-203ENST00000536218 ATP2A3Q93084 1043 aa14.28□□□□□ -0.12
LIG1-203ENST00000536218 PIWIL1Q96J94 861 aaKnown RBP14.28□□□□□ -0.12
LIG1-203ENST00000536218 SERAC1Q96JX3 654 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms