RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 FEZ2Q9UHY8 353 aaPredicted RBP16.68■□□□□ 0.26
VAMP1-205ENST00000535927 CDC23Q9UJX2 597 aa16.68■□□□□ 0.26
VAMP1-205ENST00000535927 NEU3Q9UQ49 428 aa16.68■□□□□ 0.26
VAMP1-205ENST00000535927 MYOFQ9NZM1 2061 aa16.68■□□□□ 0.26
VAMP1-205ENST00000535927 GOLGA6L10A0A0M3HER8 536 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 ARHGAP42A6NI28 874 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 HACD1B0YJ81 288 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 TYRP14679 529 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 SULT2A1Q06520 285 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 CKAP4Q07065 602 aaKnown RBP16.67■□□□□ 0.26
VAMP1-205ENST00000535927 KLF1Q13351 362 aaPredicted RBP16.67■□□□□ 0.26
VAMP1-205ENST00000535927 PDK1Q15118 436 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 WHAMMP3Q1A5X7 153 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 ANO4Q32M45 955 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 TMEM31Q5JXX7 168 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 AFMIDQ63HM1 303 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 DRICH1Q6PGQ1 229 aaPredicted RBP16.67■□□□□ 0.26
VAMP1-205ENST00000535927 METTL3Q86U44 580 aaKnown RBP16.67■□□□□ 0.26
VAMP1-205ENST00000535927 RALGPS2Q86X27 583 aaPredicted RBP16.67■□□□□ 0.26
VAMP1-205ENST00000535927 MFN1Q8IWA4 741 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.67■□□□□ 0.26
VAMP1-205ENST00000535927 CCDC26Q8TAB7 109 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 EBF3Q9H4W6 596 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 HPS4Q9NQG7 708 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 KLHL11Q9NVR0 708 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 MPP6Q9NZW5 540 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 HPCAL4Q9UM19 191 aa16.67■□□□□ 0.26
VAMP1-205ENST00000535927 A0A0A0MRY4 1105 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 ZSCAN5CA6NGD5 496 aaPredicted RBP16.66■□□□□ 0.26
VAMP1-205ENST00000535927 NEDD8-MDP1E9PL57 170 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 MTSS1O43312 755 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 TSPAN3O60637 253 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 RAMP2O60895 175 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 FGGP02679 453 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 VASPP50552 380 aaPredicted RBP16.66■□□□□ 0.26
VAMP1-205ENST00000535927 DNA2P51530 1060 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 GEMIN4P57678 1058 aaKnown RBP16.66■□□□□ 0.26
VAMP1-205ENST00000535927 SLC20A2Q08357 652 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 MMRN1Q13201 1228 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 LONRF2Q1L5Z9 754 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 ALFQ53S48 1182 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 KIAA0907Q7Z7F0 614 aaPredicted RBP16.66■□□□□ 0.26
VAMP1-205ENST00000535927 CREG2Q8IUH2 290 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 UBALD2Q8IYN6 164 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 ACDQ96AP0 544 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 RUNDC3BQ96NL0 473 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 TSGA13Q96PP4 275 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 RPP25Q9BUL9 199 aaKnown RBP16.66■□□□□ 0.26
VAMP1-205ENST00000535927 MAGEB5Q9BZ81 275 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 EPHX3Q9H6B9 360 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 HAUS2Q9NVX0 235 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 DEC1Q9P2X7 70 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 SORCS3Q9UPU3 1222 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 SNX10Q9Y5X0 201 aa16.66■□□□□ 0.26
VAMP1-205ENST00000535927 CCDC188H7C350 402 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 PPP1R12AO14974 1030 aaPredicted RBP16.65■□□□□ 0.26
VAMP1-205ENST00000535927 URI1O94763 535 aaPredicted RBP16.65■□□□□ 0.26
VAMP1-205ENST00000535927 CNTN5O94779 1100 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 RHOCP08134 193 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 CXCR5P32302 372 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 GNA12Q03113 381 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 LMNB2Q03252 620 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 ZNF211Q13398 564 aaPredicted RBP16.65■□□□□ 0.26
VAMP1-205ENST00000535927 GRM2Q14416 872 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 POLD3Q15054 466 aaPredicted RBP16.65■□□□□ 0.26
VAMP1-205ENST00000535927 EIF4HQ15056 248 aaKnown RBP16.65■□□□□ 0.26
VAMP1-205ENST00000535927 CCNG2Q16589 344 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 DNTTIP2Q5QJE6 756 aaKnown RBP16.65■□□□□ 0.26
VAMP1-205ENST00000535927 NCBP2-AS2Q69YL0 99 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 TIGD7Q6NT04 549 aaPredicted RBP16.65■□□□□ 0.26
VAMP1-205ENST00000535927 ETFBKMTQ8IXQ9 262 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 CFAP52Q8N1V2 620 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 CARNMT1Q8N4J0 409 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 MNS1Q8NEH6 495 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 KCNV2Q8TDN2 545 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 COG1Q8WTW3 980 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 CASKIN2Q8WXE0 1202 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 ASIC4Q96FT7 647 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 LRRC19Q9H756 370 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 DUSP12Q9UNI6 340 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 DRG1Q9Y295 367 aaKnown RBP16.65■□□□□ 0.26
VAMP1-205ENST00000535927 XIRP2A4UGR9 3374 aa16.65■□□□□ 0.26
VAMP1-205ENST00000535927 CFAP69A5D8W1 941 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 MAN2B1O00754 1011 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 TRDMT1O14717 391 aaKnown RBP16.64■□□□□ 0.25
VAMP1-205ENST00000535927 NPC1O15118 1278 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 KRT10P13645 584 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 ARSAP15289 507 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 CCNCP24863 283 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 STIP1P31948 543 aaKnown RBP16.64■□□□□ 0.25
VAMP1-205ENST00000535927 GJA4P35212 333 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 GGCXP38435 758 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 DGKGP49619 791 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 TUBB4BP68371 445 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 GALNT2Q10471 571 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 KAZNQ674X7 775 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 AHI1Q8N157 1196 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 KDM1BQ8NB78 822 aa16.64■□□□□ 0.25
VAMP1-205ENST00000535927 HDAC11Q96DB2 347 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms