RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 TRHDEQ9UKU6 1024 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 MYO18AQ92614 2054 aaKnown RBP19.25■□□□□ 0.67
CLPB-205ENST00000535477 ARHGAP42A6NI28 874 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 COCHO43405 550 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 MAFKO60675 156 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 USP12O75317 370 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 ZNF189O75820 626 aaPredicted RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 CCNB1P14635 433 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 CHN1P15882 459 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 PAPOLAP51003 745 aaKnown RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 CDK16Q00536 496 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 FPGSQ05932 587 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 RING1Q06587 406 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 PPIGQ13427 754 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLPB-205ENST00000535477 VEPH1Q14D04 833 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 CASC4Q6P4E1 433 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 LEKR1Q6ZMV7 388 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 NLRP14Q86W24 1093 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 CHSY1Q86X52 802 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 CIR1Q86X95 450 aaPredicted RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 RIBC1Q8N443 379 aaPredicted RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 TEKT5Q96M29 485 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 GORASP1Q9BQQ3 440 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 CNOT10Q9H9A5 744 aaKnown RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 KCNK9Q9NPC2 374 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 SHROOM3Q8TF72 1996 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 RASA4BC9J798 803 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 RASA4O43374 803 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 TSHRP16473 764 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 KRT15P19012 456 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 LSP1P33241 339 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 KPNA1P52294 538 aaPredicted RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 KLHL38Q2WGJ6 581 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 KBTBD12Q3ZCT8 623 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 NADSYN1Q6IA69 706 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 OTOP3Q7RTS5 596 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 TADA2BQ86TJ2 420 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 PRPF39Q86UA1 669 aaKnown RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 MAML1Q92585 1016 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 CDK5RAP1Q96SZ6 601 aaKnown RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 PAFAH2Q99487 392 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 VAT1Q99536 393 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 GBA3Q9H227 469 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 EIF2B3Q9NR50 452 aaKnown RBP19.24■□□□□ 0.67
CLPB-205ENST00000535477 UBP1Q9NZI7 540 aa19.24■□□□□ 0.67
CLPB-205ENST00000535477 PTPRSQ13332 1948 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 A6NNZ2 444 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 RHOQP17081 205 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 MSH2P43246 934 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 NUMBP49757 651 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 TUBB8Q3ZCM7 444 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 NUGGCQ68CJ6 796 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 ITPRIPL1Q6GPH6 555 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 LRRC8BQ6P9F7 803 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 DNAJB7Q7Z6W7 309 aaPredicted RBP19.23■□□□□ 0.67
CLPB-205ENST00000535477 TDRPQ86YL5 185 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 CNTD1Q8N815 330 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 KLHL23Q8NBE8 558 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 ZSCAN18Q8TBC5 510 aaPredicted RBP19.23■□□□□ 0.67
CLPB-205ENST00000535477 OVCA2Q8WZ82 227 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 DPF3Q92784 378 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 LRRC39Q96DD0 335 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 MYEOVQ96EZ4 313 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 TSGA13Q96PP4 275 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 CYTH2Q99418 400 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 EBNA1BP2Q99848 306 aaKnown RBP19.23■□□□□ 0.67
CLPB-205ENST00000535477 NOL6Q9H6R4 1146 aaKnown RBP19.23■□□□□ 0.67
CLPB-205ENST00000535477 PPANQ9NQ55 473 aaKnown RBP19.23■□□□□ 0.67
CLPB-205ENST00000535477 PSMC3IPQ9P2W1 217 aaPredicted RBP19.23■□□□□ 0.67
CLPB-205ENST00000535477 PPARGC1AQ9UBK2 798 aaKnown RBP19.23■□□□□ 0.67
CLPB-205ENST00000535477 SLC24A2Q9UI40 661 aa19.23■□□□□ 0.67
CLPB-205ENST00000535477 HBS1LQ9Y450 684 aaKnown RBP19.23■□□□□ 0.67
CLPB-205ENST00000535477 C2orf78A6NCI8 922 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 WASH4PA8MWX3 477 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 BRAFP15056 766 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 MGAT1P26572 445 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 SNX30Q5VWJ9 437 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 AFMIDQ63HM1 303 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 UNC5AQ6ZN44 842 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 ZNF354CQ86Y25 554 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 MYRFLQ96LU7 910 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 PRMT1Q99873 361 aaKnown RBP19.22■□□□□ 0.67
CLPB-205ENST00000535477 PLAC1Q9HBJ0 212 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 GKN1Q9NS71 199 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 INSL5Q9Y5Q6 135 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 CARNS1A5YM72 827 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 CNPP09543 421 aaKnown RBP19.22■□□□□ 0.67
CLPB-205ENST00000535477 MLNP12872 115 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 SYN1P17600 705 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 HARS2P49590 506 aaKnown RBP19.22■□□□□ 0.67
CLPB-205ENST00000535477 EPHB3P54753 998 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 HTRA4P83105 476 aaPredicted RBP19.22■□□□□ 0.67
CLPB-205ENST00000535477 ZNF33AQ06730 810 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 CBLBQ13191 982 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 RFWD3Q6PCD5 774 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 DENND1CQ8IV53 801 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 TCEAL8Q8IYN2 117 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 CFAP52Q8N1V2 620 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 OR52K1Q8NGK4 314 aa19.22■□□□□ 0.67
CLPB-205ENST00000535477 HMCESQ96FZ2 354 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms